Cluster: SW145_3_CGC46
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: SW145_3
- CGC Family ID: CGCFAM_00434
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_75381 | k141_75381_37 | 32630 | 33859 | - | 2.A.42.2.5 |
| TC | k141_75381 | k141_75381_38 | 33976 | 34440 | - | 2.A.117.1.3 |
| TF | k141_75381 | k141_75381_39 | 34542 | 35408 | + | HTH_1 |
| pfam | k141_75381 | k141_75381_40 | 35501 | 36679 | + | Thiolase_N | ketoacyl-synt | Thiolase_C |
| TC | k141_75381 | k141_75381_41 | 36997 | 37680 | + | 1.B.35.1.5 |
| CAZyme | k141_75381 | k141_75381_42 | 37924 | 39099 | - | PL22 | PL22 |
| pfam | k141_75381 | k141_75381_43 | 39400 | 40236 | + | KduI |
| pfam | k141_75381 | k141_75381_44 | 40300 | 41061 | + | adh_short | KR | adh_short_C2 |
| TC | k141_75381 | k141_75381_45 | 41374 | 42789 | + | 2.A.1.1.2 |
| TC | k141_75381 | k141_75381_46 | 42860 | 44146 | - | 3.A.1.1.11 |
| TC | k141_75381 | k141_75381_47 | 44160 | 45287 | - | 3.A.1.1.11 |
| TC | k141_75381 | k141_75381_48 | 45300 | 46202 | - | 3.A.1.1.11 |
| TC | k141_75381 | k141_75381_49 | 46195 | 47085 | - | 3.A.1.1.11 |
Gene ID: k141_75381_37
Type: TC
Location: 32630 - 33859 (-)
Type: TC
Location: 32630 - 33859 (-)
Gene ID: k141_75381_38
Type: TC
Location: 33976 - 34440 (-)
Type: TC
Location: 33976 - 34440 (-)
Gene ID: k141_75381_39
Type: TF
Location: 34542 - 35408 (+)
Type: TF
Location: 34542 - 35408 (+)
Gene ID: k141_75381_40
Type: pfam
Location: 35501 - 36679 (+)
Type: pfam
Location: 35501 - 36679 (+)
Gene ID: k141_75381_41
Type: TC
Location: 36997 - 37680 (+)
Type: TC
Location: 36997 - 37680 (+)
Gene ID: k141_75381_42
Type: CAZyme
Location: 37924 - 39099 (-)
Type: CAZyme
Location: 37924 - 39099 (-)
Gene ID: k141_75381_43
Type: pfam
Location: 39400 - 40236 (+)
Type: pfam
Location: 39400 - 40236 (+)
Gene ID: k141_75381_44
Type: pfam
Location: 40300 - 41061 (+)
Type: pfam
Location: 40300 - 41061 (+)
Gene ID: k141_75381_45
Type: TC
Location: 41374 - 42789 (+)
Type: TC
Location: 41374 - 42789 (+)
Gene ID: k141_75381_46
Type: TC
Location: 42860 - 44146 (-)
Type: TC
Location: 42860 - 44146 (-)
Gene ID: k141_75381_47
Type: TC
Location: 44160 - 45287 (-)
Type: TC
Location: 44160 - 45287 (-)
Gene ID: k141_75381_48
Type: TC
Location: 45300 - 46202 (-)
Type: TC
Location: 45300 - 46202 (-)
Gene ID: k141_75381_49
Type: TC
Location: 46195 - 47085 (-)
Type: TC
Location: 46195 - 47085 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter hoffmannii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_75381_42 | vegetarian > omnivore | 2.07380 | 0.03328 |
| k141_75381_42 | vegetarian > vegan | 1.36203 | 0.04464 |
| k141_75381_43 | vegetarian > omnivore | 1.10130 | 0.03328 |
| k141_75381_43 | vegetarian > vegan | 1.17179 | 0.04464 |
| k141_75381_44 | vegetarian > omnivore | 1.13402 | 0.03328 |
| k141_75381_46 | vegetarian > omnivore | 1.41515 | 0.03328 |
| k141_75381_47 | vegan > omnivore | 1.48291 | 0.01385 |
| k141_75381_48 | vegetarian > omnivore | 1.10633 | 0.03328 |