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Cluster: SW145_3_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_92842 k141_92842_15 15693 16055 - 4.A.4.1.1
TC k141_92842 k141_92842_16 16068 17027 - 4.A.4.1.1
TC k141_92842 k141_92842_17 17024 17587 - 4.A.4.1.1
CAZyme k141_92842 k141_92842_18 17839 18939 + GH103
NULL(UNKNOWN) k141_92842 k141_92842_19 19152 19253 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_92842 k141_92842_20 19250 19903 + 3.A.1.15.10
TC k141_92842 k141_92842_21 19900 20760 + 3.A.1.15.10
TC k141_92842 k141_92842_22 20775 21653 + 3.A.1.15.10
Gene ID: k141_92842_15
Type: TC
Location: 15693 - 16055 (-)
Gene ID: k141_92842_16
Type: TC
Location: 16068 - 17027 (-)
Gene ID: k141_92842_17
Type: TC
Location: 17024 - 17587 (-)
Gene ID: k141_92842_18
Type: CAZyme
Location: 17839 - 18939 (+)
Gene ID: k141_92842_19
Type:
Location: 19152 - 19253 (+)
Gene ID: k141_92842_20
Type: TC
Location: 19250 - 19903 (+)
Gene ID: k141_92842_21
Type: TC
Location: 19900 - 20760 (+)
Gene ID: k141_92842_22
Type: TC
Location: 20775 - 21653 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_92842_15 vegetarian > omnivore 1.85574 0.03088
k141_92842_17 vegetarian > vegan 1.06541 0.04464
k141_92842_19 vegetarian > omnivore 1.36655 0.03328
k141_92842_20 vegetarian > omnivore 2.00868 0.02769
k141_92842_21 vegetarian > omnivore 1.13752 0.03328
k141_92842_22 vegetarian > omnivore 1.15988 0.03328
k141_92842_22 vegetarian > vegan 1.12741 0.04464

🧭 Explore Read Mapping of CGC

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