y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10024736m |
Family | AA1 |
Protein Properties | Length: 597 Molecular Weight: 66821.7 Isoelectric Point: 7.4145 |
Chromosome | Chromosome/Scaffold: 1 Start: 6296745 End: 6300137 |
Description | SKU5 similar 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 53 | 520 | 0 |
QVIAVNGQFPGPLLNATTNFNVVVNVFNHLDEPLLLTWPGIQMRRDSWQDGVLGTNCPIPPRWNFTYQFQVKDQIGSFFYSPSLNFQRASGGFGPIVINN RNIIPIPFPEPDGEIIFIINDWYTQDHKALRRILDSGKELGMPDGVLINGKGPYKYNSSVPDGIDYLTAHVEPGKTYRIRVHNVGISTSLNFRIQNHNLL LVETDGCYTSQTNFTDFDIHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVTGVAILHYSNSNGPASGPLPVPKTDVSNSWSAMTQPRAIRQNTS ASGARPNPQGSFHYGQINITNTYVLRSLPPTTINGSLRATLNGISFVNPSTPVRLADRYKVKGAYKLDFPDKPFGRPLRLDRSMINATYKGFIQVVFQNN DTKIQSFHVDGYTFFVVAMDFGIWSEDKKGSYNNYDAISRSTIEVYPGGWTAVLLSLDNVGVWNIRVE |
Full Sequence |
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Protein Sequence Length: 597 Download |
MAAVSLYFFP SSAFSSFLCF VLLSGVSFAA DPFVSYDFKV SYITASPLGV RQQVIAVNGQ 60 FPGPLLNATT NFNVVVNVFN HLDEPLLLTW PGIQMRRDSW QDGVLGTNCP IPPRWNFTYQ 120 FQVKDQIGSF FYSPSLNFQR ASGGFGPIVI NNRNIIPIPF PEPDGEIIFI INDWYTQDHK 180 ALRRILDSGK ELGMPDGVLI NGKGPYKYNS SVPDGIDYLT AHVEPGKTYR IRVHNVGIST 240 SLNFRIQNHN LLLVETDGCY TSQTNFTDFD IHVGQSYSFL VTMDQNATSD YYIVASARFV 300 NETVWQRVTG VAILHYSNSN GPASGPLPVP KTDVSNSWSA MTQPRAIRQN TSASGARPNP 360 QGSFHYGQIN ITNTYVLRSL PPTTINGSLR ATLNGISFVN PSTPVRLADR YKVKGAYKLD 420 FPDKPFGRPL RLDRSMINAT YKGFIQVVFQ NNDTKIQSFH VDGYTFFVVA MDFGIWSEDK 480 KGSYNNYDAI SRSTIEVYPG GWTAVLLSLD NVGVWNIRVE NLDRWYLGEE TYMRIINPEE 540 NGQTEMDAPD NVLYCGALRH LQKQQHHSAA TSMLNGHLKL MFSMLMALLP SVFTFF* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02792 | PLN02792 | 1.0e-167 | 29 | 556 | 531 | + oxidoreductase | ||
PLN02835 | PLN02835 | 8.0e-174 | 20 | 556 | 540 | + oxidoreductase | ||
PLN02168 | PLN02168 | 1.0e-179 | 18 | 559 | 556 | + copper ion binding / pectinesterase | ||
PLN00044 | PLN00044 | 0 | 29 | 567 | 544 | + multi-copper oxidase-related protein; Provisional | ||
PLN02354 | PLN02354 | 0 | 18 | 569 | 559 | + copper ion binding / oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA23065.1 | 0 | 12 | 563 | 6 | 558 | Pollen-specific protein precursor like [Arabidopsis thaliana] |
RefSeq | NP_194254.2 | 0 | 11 | 577 | 5 | 572 | SKS1 (SKU5 SIMILAR 1); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_199961.1 | 0 | 22 | 595 | 16 | 591 | SKS2 (SKU5 SIMILAR 2); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002318885.1 | 0 | 17 | 595 | 14 | 592 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510943.1 | 0 | 20 | 595 | 14 | 591 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 36 | 528 | 6 | 516 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 1asq_A | 0 | 36 | 528 | 6 | 516 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 1asp_B | 0 | 36 | 528 | 6 | 516 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 1asp_A | 0 | 36 | 528 | 6 | 516 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 1aso_B | 0 | 36 | 528 | 6 | 516 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |