y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb03g037970.1 |
Family | AA1 |
Protein Properties | Length: 559 Molecular Weight: 62004.9 Isoelectric Point: 8.8147 |
Chromosome | Chromosome/Scaffold: 3 Start: 65896749 End: 65899311 |
Description | SKU5 similar 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 50 | 510 | 0 |
TPQKVILINDMLPGPTINCTSNNNIVINVFNMLDQPLLFTWHGIQQRKNSWQDGMPGTMCPIQPNTNFTYHWQPKDQIGSFVYYPSTGMQRAAGAYGLIS VHSRDLIPVPFDRPADDFPVLVGDWYTKDHAVLAKNLDAGKGIGRPSGLVINGKNEKDAANPPMYNVEAGKTYRFRICNVGMKASINIGIQNHIMKLVEM EGSHTMQNDYDSLDIHVGQCLSVLVTADQKPGDYLLVASTRFIKEVSTTTAVIRYKGASAPPPAKLPESPSGWAWSINQARSFRWNLTASAARPNPQGSY HYGQINITRTIRLGIGRGKVDGKERFGINGVSHVDPETPVKLAEYFNATDGVFQYDLIGDVPPAKSAPTKMAPNVLRAEFRTFIEVVFENPEKSIDTFHI DGYAFFAVGMGPGKWTPACRSTYNLLDTVSRHTVQVYPRSWTAVMMTFDNAGMWSIRSNIW |
Full Sequence |
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Protein Sequence Length: 559 Download |
MVWSAGRMAM RGASAALLVL ALVAAVARAE DPYHFFEWKV TYGTKTIMGT PQKVILINDM 60 LPGPTINCTS NNNIVINVFN MLDQPLLFTW HGIQQRKNSW QDGMPGTMCP IQPNTNFTYH 120 WQPKDQIGSF VYYPSTGMQR AAGAYGLISV HSRDLIPVPF DRPADDFPVL VGDWYTKDHA 180 VLAKNLDAGK GIGRPSGLVI NGKNEKDAAN PPMYNVEAGK TYRFRICNVG MKASINIGIQ 240 NHIMKLVEME GSHTMQNDYD SLDIHVGQCL SVLVTADQKP GDYLLVASTR FIKEVSTTTA 300 VIRYKGASAP PPAKLPESPS GWAWSINQAR SFRWNLTASA ARPNPQGSYH YGQINITRTI 360 RLGIGRGKVD GKERFGINGV SHVDPETPVK LAEYFNATDG VFQYDLIGDV PPAKSAPTKM 420 APNVLRAEFR TFIEVVFENP EKSIDTFHID GYAFFAVGMG PGKWTPACRS TYNLLDTVSR 480 HTVQVYPRSW TAVMMTFDNA GMWSIRSNIW ERNYLGEQLY ISVTSPERSL RDEYNMPETS 540 LRCGKVVGLP LPPSYLSV* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02354 | PLN02354 | 0 | 30 | 557 | 529 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 30 | 548 | 520 | + oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 30 | 548 | 520 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 30 | 545 | 521 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 32 | 546 | 531 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27218.1 | 0 | 1 | 558 | 1 | 557 | unknown [Zea mays] |
GenBank | ACN34077.1 | 0 | 1 | 558 | 1 | 559 | unknown [Zea mays] |
RefSeq | NP_001044620.1 | 0 | 10 | 556 | 4 | 551 | Os01g0816700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151662.1 | 0 | 1 | 558 | 1 | 559 | L-ascorbate oxidase [Zea mays] |
RefSeq | XP_002456532.1 | 0 | 1 | 558 | 1 | 558 | hypothetical protein SORBIDRAFT_03g037970 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 36 | 544 | 6 | 539 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1asq_A | 0 | 36 | 544 | 6 | 539 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1asp_B | 0 | 36 | 544 | 6 | 539 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1asp_A | 0 | 36 | 544 | 6 | 539 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 1aso_B | 0 | 36 | 544 | 6 | 539 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |