y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra022551 |
Family | AA1 |
Protein Properties | Length: 598 Molecular Weight: 66715.1 Isoelectric Point: 5.6042 |
Chromosome | Chromosome/Scaffold: 02 Start: 9049861 End: 9052688 |
Description | SKU5 similar 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 51 | 519 | 0 |
QQVIAINGKFPGPVINVTTNYNVDVNVFNRLDEPFLFTWNGIEMRGESWQDGVLGTNCPIPPNWNFTYSFQVKDQIGSFFYFPSLNLQRASGGFGPIIIN NRDRIPIPFNEPDGEISFMIGDWYTQNHTALRGVLDSGEELGMPDGVLINGKGPYKYTSSVPDGIQYETIDVDPGKTYRIRVHNVGTSTSLNFRIQNHKM LLVETEGHYNLQTNFTDFDIHVGQSYSFLVTMDQNASSDYYIVASARFVNETAWQRVTGVGVLHYSNSKGQASGPLPVPATDVSQPWSVMNQQRAIRQNT TASGARPNPQGSYHYGEINITDTYILRSMPPTKINGSVHATLNGISFLNPSTPMRLADKHKVNGVYKLDFPERPADNIPPRLESSIINATYKGFIQIIFQ NNDTKVQSFHIDGYSFYVVAMDFGNWTEDKKGSYNNWDAASRSTVEVYPGAWTAVLLSLDNAGVWNIRV |
Full Sequence |
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Protein Sequence Length: 598 Download |
MAAAYFFSRF TTFPFLFSLA LLCGFSLAGD PSVSYVFEVS YITASPLGVP QQVIAINGKF 60 PGPVINVTTN YNVDVNVFNR LDEPFLFTWN GIEMRGESWQ DGVLGTNCPI PPNWNFTYSF 120 QVKDQIGSFF YFPSLNLQRA SGGFGPIIIN NRDRIPIPFN EPDGEISFMI GDWYTQNHTA 180 LRGVLDSGEE LGMPDGVLIN GKGPYKYTSS VPDGIQYETI DVDPGKTYRI RVHNVGTSTS 240 LNFRIQNHKM LLVETEGHYN LQTNFTDFDI HVGQSYSFLV TMDQNASSDY YIVASARFVN 300 ETAWQRVTGV GVLHYSNSKG QASGPLPVPA TDVSQPWSVM NQQRAIRQNT TASGARPNPQ 360 GSYHYGEINI TDTYILRSMP PTKINGSVHA TLNGISFLNP STPMRLADKH KVNGVYKLDF 420 PERPADNIPP RLESSIINAT YKGFIQIIFQ NNDTKVQSFH IDGYSFYVVA MDFGNWTEDK 480 KGSYNNWDAA SRSTVEVYPG AWTAVLLSLD NAGVWNIRVQ NLDRWYLGQE TYMRIINPEE 540 NGSTEMDQPG NALYCGALKS MQKDQIHSSA TSILNGKWNL VFSLVMVLLA LVPVFFC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02792 | PLN02792 | 1.0e-172 | 25 | 556 | 534 | + oxidoreductase | ||
PLN02168 | PLN02168 | 5.0e-178 | 21 | 556 | 547 | + copper ion binding / pectinesterase | ||
PLN02835 | PLN02835 | 2.0e-180 | 20 | 556 | 539 | + oxidoreductase | ||
PLN00044 | PLN00044 | 0 | 28 | 588 | 569 | + multi-copper oxidase-related protein; Provisional | ||
PLN02354 | PLN02354 | 0 | 28 | 563 | 539 | + copper ion binding / oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA23065.1 | 0 | 15 | 563 | 11 | 558 | Pollen-specific protein precursor like [Arabidopsis thaliana] |
RefSeq | NP_194254.2 | 0 | 15 | 576 | 11 | 571 | SKS1 (SKU5 SIMILAR 1); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_199961.1 | 0 | 21 | 590 | 16 | 586 | SKS2 (SKU5 SIMILAR 2); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002318885.1 | 0 | 15 | 591 | 13 | 589 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510943.1 | 0 | 7 | 590 | 3 | 586 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 35 | 557 | 6 | 540 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asq_A | 0 | 35 | 557 | 6 | 540 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asp_B | 0 | 35 | 557 | 6 | 540 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1asp_A | 0 | 35 | 557 | 6 | 540 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 1aso_B | 0 | 35 | 557 | 6 | 540 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |