y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra017796 |
Family | AA1 |
Protein Properties | Length: 541 Molecular Weight: 60831.7 Isoelectric Point: 9.7118 |
Chromosome | Chromosome/Scaffold: 03 Start: 30532108 End: 30534361 |
Description | SKU5 similar 15 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 48 | 500 | 0 |
PQQVILINGQFPGPAIEAVTNNNIVVNLINKLDEPFLITWNGIKQRRTSWQDGVLGTNCPIPPNSNWTYQFQLKDQIGTFTYFASTSMHRASGAFGALNI NQRSVITTPYLTPDGDFTLLVTDWFKLSHKDLRKRLDAGYALPLPDALLINGASKGLIFTGQQGKTYKFRVSNVGIATSINFRIQNHTLTLIEVEGAHTL QESYESLDVHVGQSVTVLVTLKASVRDYYIVASSRFTKPVLNTTASLRYLGSKNAVYGPLPVGPTYHIHWSMKQARTIRMNLTANAARPNPQGSYHYGTI PINRTLVLANAATMLYGKLRYTVNRISYINPTTPLKLADWYNISGVFDFKTILSTPTIGPAHFGTSVFDIELHEFVEIVFQNDERSIQSWHMDGTSAFLV GFGSGTWNETMRKRYNLVDAVARHTFQVYPLSWTSILVSLDNKGMWNLRSQIW |
Full Sequence |
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Protein Sequence Length: 541 Download |
MKQTNLLCNL FIGTLLVWLG SVLVKAEDPY LFYTWTVTYG TRSPLGVPQQ VILINGQFPG 60 PAIEAVTNNN IVVNLINKLD EPFLITWNGI KQRRTSWQDG VLGTNCPIPP NSNWTYQFQL 120 KDQIGTFTYF ASTSMHRASG AFGALNINQR SVITTPYLTP DGDFTLLVTD WFKLSHKDLR 180 KRLDAGYALP LPDALLINGA SKGLIFTGQQ GKTYKFRVSN VGIATSINFR IQNHTLTLIE 240 VEGAHTLQES YESLDVHVGQ SVTVLVTLKA SVRDYYIVAS SRFTKPVLNT TASLRYLGSK 300 NAVYGPLPVG PTYHIHWSMK QARTIRMNLT ANAARPNPQG SYHYGTIPIN RTLVLANAAT 360 MLYGKLRYTV NRISYINPTT PLKLADWYNI SGVFDFKTIL STPTIGPAHF GTSVFDIELH 420 EFVEIVFQND ERSIQSWHMD GTSAFLVGFG SGTWNETMRK RYNLVDAVAR HTFQVYPLSW 480 TSILVSLDNK GMWNLRSQIW SRRYLGQELY VRVWNDEKSL YTEADPPLNA LYCGLAKRPL 540 * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02835 | PLN02835 | 0 | 6 | 536 | 531 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 15 | 537 | 532 | + copper ion binding / oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 23 | 536 | 514 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 23 | 536 | 518 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 22 | 534 | 525 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18561.1 | 0 | 6 | 539 | 69 | 601 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195433.1 | 0 | 1 | 540 | 1 | 541 | sks15 (SKU5 Similar 15); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_565554.1 | 0 | 23 | 539 | 22 | 538 | sks16 (SKU5 Similar 16); copper ion binding / pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002310164.1 | 0 | 1 | 539 | 1 | 537 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522339.1 | 0 | 1 | 539 | 1 | 540 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 33 | 540 | 6 | 545 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1asq_A | 0 | 33 | 540 | 6 | 545 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1asp_B | 0 | 33 | 540 | 6 | 545 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1asp_A | 0 | 33 | 540 | 6 | 545 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 1aso_B | 0 | 33 | 540 | 6 | 545 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |