y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10010844m |
Family | AA1 |
Protein Properties | Length: 544 Molecular Weight: 60688.5 Isoelectric Point: 6.0177 |
Chromosome | Chromosome/Scaffold: 1 Start: 7665825 End: 7669634 |
Description | SKU5 similar 8 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 35 | 482 | 0 |
GILINGKFPGPDIVSVTNDNLIINVFNHLDEPFLVSWSGIENMKNSYQDGVYGTTCPIPPGKNYTYALRVKDQIGSFYYFPSLGFHKAAGGFGAIRIYSR PKIPVPFPAPADDYTVLIGDWYNTNHKDLRTQLDNGGTLPLPDGILINGRGSDATVNVEPGKTYRLRISNVGLQNSLNFRIQNHMMTLVEVEGTHTVQTA FSSLDVHVGQSYSVLITADQPAKDYYIVVSSRFTSKILTTTGVLHYSNSAGPVSGPIPDGPNQLNWSLDQAGSIKTNLTASGPRPNPQGSYHYGMIKVTR TIRLANSVGNINGKQRYAVNSASFYPAETPLKLADYFKIDGVYRPGSIPDQPTYGAMFPVTSVMQTDYKAFVEIVFENWEDIIQSWHFDGYSFYVVGMEL GKWSADSRKVYNLNDAVSRCTVQVYPKSWTAIYISLDNVGMWNLRSES |
Full Sequence |
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Protein Sequence Length: 544 Download |
MEVKSMNTTA TMISLLFLIG VVASEDPYRF FEWHGILING KFPGPDIVSV TNDNLIINVF 60 NHLDEPFLVS WSGIENMKNS YQDGVYGTTC PIPPGKNYTY ALRVKDQIGS FYYFPSLGFH 120 KAAGGFGAIR IYSRPKIPVP FPAPADDYTV LIGDWYNTNH KDLRTQLDNG GTLPLPDGIL 180 INGRGSDATV NVEPGKTYRL RISNVGLQNS LNFRIQNHMM TLVEVEGTHT VQTAFSSLDV 240 HVGQSYSVLI TADQPAKDYY IVVSSRFTSK ILTTTGVLHY SNSAGPVSGP IPDGPNQLNW 300 SLDQAGSIKT NLTASGPRPN PQGSYHYGMI KVTRTIRLAN SVGNINGKQR YAVNSASFYP 360 AETPLKLADY FKIDGVYRPG SIPDQPTYGA MFPVTSVMQT DYKAFVEIVF ENWEDIIQSW 420 HFDGYSFYVV GMELGKWSAD SRKVYNLNDA VSRCTVQVYP KSWTAIYISL DNVGMWNLRS 480 ESWERQYLGQ QFYMRVYTTS TSLRDEYLIP KNALLCGKAS GFNQDQPDEE LVELREELTL 540 GGE* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 0 | 1 | 527 | 541 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 12 | 523 | 532 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 21 | 527 | 530 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 12 | 521 | 525 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 13 | 520 | 540 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL09733.1 | 0 | 6 | 521 | 1 | 535 | At1g76160/T23E18_10 [Arabidopsis thaliana] |
GenBank | AAM97070.1 | 0 | 6 | 521 | 1 | 535 | pectinesterase, putative [Arabidopsis thaliana] |
RefSeq | NP_173603.1 | 0 | 1 | 527 | 1 | 541 | sks8 (SKU5 Similar 8); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_173604.1 | 0 | 1 | 520 | 1 | 534 | sks7 (SKU5 Similar 7); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_177743.1 | 0 | 6 | 521 | 1 | 535 | sks5 (SKU5 Similar 5); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 38 | 517 | 27 | 539 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 1asq_A | 0 | 38 | 517 | 27 | 539 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 1asp_B | 0 | 38 | 517 | 27 | 539 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 1asp_A | 0 | 38 | 517 | 27 | 539 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 1aso_B | 0 | 38 | 517 | 27 | 539 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |