y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb02g001610.1 |
Family | AA1 |
Protein Properties | Length: 292 Molecular Weight: 30919.2 Isoelectric Point: 9.261 |
Chromosome | Chromosome/Scaffold: 2 Start: 1473023 End: 1474333 |
Description | SKU5 similar 17 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 45 | 271 | 0 |
TQQGILINGQFPGPRIDCVTNDNLVVTVLNALDEPFLLTWNGIKQRKNSWQDGVAGTNCAIPPGANYTYHFQTKDQIGTFFYFPSLALHRAAGGFGALNV YQRPAIPVPYPPPAGDFTLLVGDWYAAASPHVDLRNALDAATGGAALPPPDALLINGAPSGAATFVGNGGGTYLFRVSNVGLRASVNVRIQGHALRLVEV EGTHPLQNVYDSLDVHAGQSLAFLVLG |
Full Sequence |
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Protein Sequence Length: 292 Download |
MAAPPPAPFL LLLAVAAASL AGADDPYRYF TWTVTYGPIT PLGTTQQGIL INGQFPGPRI 60 DCVTNDNLVV TVLNALDEPF LLTWNGIKQR KNSWQDGVAG TNCAIPPGAN YTYHFQTKDQ 120 IGTFFYFPSL ALHRAAGGFG ALNVYQRPAI PVPYPPPAGD FTLLVGDWYA AASPHVDLRN 180 ALDAATGGAA LPPPDALLIN GAPSGAATFV GNGGGTYLFR VSNVGLRASV NVRIQGHALR 240 LVEVEGTHPL QNVYDSLDVH AGQSLAFLVL GSGRRQRRVV RRARHAAQAR G* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02168 | PLN02168 | 2.0e-77 | 26 | 269 | 244 | + copper ion binding / pectinesterase | ||
PLN02991 | PLN02991 | 5.0e-87 | 24 | 269 | 246 | + oxidoreductase | ||
PLN02792 | PLN02792 | 4.0e-88 | 24 | 269 | 248 | + oxidoreductase | ||
PLN02354 | PLN02354 | 1.0e-105 | 24 | 269 | 251 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 1.0e-109 | 24 | 269 | 246 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27681.1 | 0 | 24 | 269 | 24 | 269 | unknown [Zea mays] |
GenBank | ACR38095.1 | 0 | 24 | 269 | 24 | 275 | unknown [Zea mays] |
RefSeq | NP_001058771.1 | 0 | 24 | 286 | 26 | 286 | Os07g0119400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002310162.1 | 0 | 12 | 269 | 13 | 263 | multicopper oxidase [Populus trichocarpa] |
RefSeq | XP_002459273.1 | 0 | 1 | 291 | 1 | 291 | hypothetical protein SORBIDRAFT_02g001610 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 1e-24 | 28 | 285 | 4 | 286 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1asq_A | 1e-24 | 28 | 285 | 4 | 286 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1asp_B | 1e-24 | 28 | 285 | 4 | 286 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1asp_A | 1e-24 | 28 | 285 | 4 | 286 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1aso_B | 1e-24 | 28 | 285 | 4 | 286 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |