y
Basic Information | |
---|---|
Species | Aquilegia coerulea |
Cazyme ID | Aquca_003_00198.1 |
Family | AA1 |
Protein Properties | Length: 559 Molecular Weight: 62518.2 Isoelectric Point: 8.8426 |
Chromosome | Chromosome/Scaffold: 3 Start: 3203787 End: 3206140 |
Description | SKU5 similar 12 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 47 | 510 | 0 |
QQVIMINNQFPGPNINSTSNNNLIVNVFNNLDEPLLFSWNGIQQRKNSWMEGMPGTNCPIPPGKNYTYHFQPKDQIGSYFYFPSTGFQKAAGGFGGLRTN SRLLIPVPYADPEDDYTVLIGDWYTKSHTALRKKLDAGKLLGRPDGVLMNGKTGKTGGKDDEPLFTLKQGKTYKIRICNVGIKTSLNFRIQGHSMKLVEM DGSHVVQNVYDSLDVHLGQCYAVLVTADQTPRDYYMVTSTRFTKYMLSATGIIRYVDASGAKLGGPPSSALPEAPVGWAWSLNQFRSYRWNLTASAARPN PQGSYHYGQINITRTIKILNTAGPVDGKLRYGINGVSHVDGETPLKLAEYFGVGEKVFKYNTIVDDPTDTKTIVAQPNVLNATFRDFIEIIFENTEKSIQ SWHLDGYSFFPVAIETGKWSPEKRKNYNLLDAVSRHSIEVYPKSWAAIMLTFDNAGMWNLRTNL |
Full Sequence |
---|
Protein Sequence Length: 559 Download |
MAGRSQAVLC ILLSSLAAFA LVQAEDPYLF FTWNVTYGTI SPMGVPQQVI MINNQFPGPN 60 INSTSNNNLI VNVFNNLDEP LLFSWNGIQQ RKNSWMEGMP GTNCPIPPGK NYTYHFQPKD 120 QIGSYFYFPS TGFQKAAGGF GGLRTNSRLL IPVPYADPED DYTVLIGDWY TKSHTALRKK 180 LDAGKLLGRP DGVLMNGKTG KTGGKDDEPL FTLKQGKTYK IRICNVGIKT SLNFRIQGHS 240 MKLVEMDGSH VVQNVYDSLD VHLGQCYAVL VTADQTPRDY YMVTSTRFTK YMLSATGIIR 300 YVDASGAKLG GPPSSALPEA PVGWAWSLNQ FRSYRWNLTA SAARPNPQGS YHYGQINITR 360 TIKILNTAGP VDGKLRYGIN GVSHVDGETP LKLAEYFGVG EKVFKYNTIV DDPTDTKTIV 420 AQPNVLNATF RDFIEIIFEN TEKSIQSWHL DGYSFFPVAI ETGKWSPEKR KNYNLLDAVS 480 RHSIEVYPKS WAAIMLTFDN AGMWNLRTNL WERYYLGQQL YFSVLSPNYS LRDEYNIPDN 540 AELCGLVKGM PMPKPYTP* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02354 | PLN02354 | 0 | 1 | 558 | 559 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 7 | 545 | 540 | + oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 1 | 555 | 555 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 12 | 555 | 547 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 4 | 548 | 557 | + copper ion binding / pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_175953.1 | 0 | 1 | 556 | 1 | 552 | sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002299087.1 | 0 | 1 | 557 | 1 | 550 | hypothetical protein POPTRDRAFT_750403 [Populus trichocarpa] |
RefSeq | XP_002303974.1 | 0 | 9 | 557 | 7 | 552 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523381.1 | 0 | 6 | 557 | 2 | 550 | multicopper oxidase, putative [Ricinus communis] |
RefSeq | XP_002523382.1 | 0 | 1 | 557 | 1 | 550 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 31 | 545 | 6 | 539 | A Chain A, Structural Basis For Dsrna Duplex Backbone Recognition By Mda5 |
PDB | 1asq_A | 0 | 31 | 545 | 6 | 539 | A Chain A, Structural Basis For Dsrna Duplex Backbone Recognition By Mda5 |
PDB | 1asp_B | 0 | 31 | 545 | 6 | 539 | A Chain A, Structural Basis For Dsrna Duplex Backbone Recognition By Mda5 |
PDB | 1asp_A | 0 | 31 | 545 | 6 | 539 | A Chain A, Structural Basis For Dsrna Duplex Backbone Recognition By Mda5 |
PDB | 1aso_B | 0 | 31 | 545 | 6 | 539 | A Chain A, Structural Basis For Dsrna Duplex Backbone Recognition By Mda5 |