y
Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra008241 |
Family | AA1 |
Protein Properties | Length: 549 Molecular Weight: 60873.7 Isoelectric Point: 9.1807 |
Chromosome | Chromosome/Scaffold: 02 Start: 14018661 End: 14024104 |
Description | SKU5 similar 5 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 34 | 503 | 0 |
VTYGDIYPLGVRQQGILIDGKFPGPDIHSVTNDNLVINIFNNLDEPFLLSWNGVQQRRNSYVDGVYGTTCPIPPGKNYTYMLQVKDQIGSFYYFPSLAFH KAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTDLKAKLDSGRKLPLPDGILINGRGTGATLNVEQGKTYRLRISNVGLQHSLNFRIQNHKM KVVEVEGTHTLQTTFSSLDVHVGQSYSVLVTADQPAHDYYVVVSSRFTSTVLTTTGVLRYSGSSGGVSGPIPGGPTIQIDWSLNQARAIRTNLTASGPRP NPQGSYHYGMINTTRTIRLASSAGQVNGKQRYAVNSVSFNPADTPLKLADYFKIDADYFKIDGVYRVGSVQSQPTGGGIYLDTSVLQADYRTFVEIVFEN PENIVQTWHLDGYSFWVVGMDGGKWSPDSRNEYNLRDALARCTVQVYPSSWTAIYIALDNVGMWNLRSEF |
Full Sequence |
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Protein Sequence Length: 549 Download |
MAANASFATA LTIVFSILFT VTAEDPYRFF NWNVTYGDIY PLGVRQQGIL IDGKFPGPDI 60 HSVTNDNLVI NIFNNLDEPF LLSWNGVQQR RNSYVDGVYG TTCPIPPGKN YTYMLQVKDQ 120 IGSFYYFPSL AFHKAAGGFG GIRILSRPRI PVPFPDPAGD YTVLIGDWYK SNHTDLKAKL 180 DSGRKLPLPD GILINGRGTG ATLNVEQGKT YRLRISNVGL QHSLNFRIQN HKMKVVEVEG 240 THTLQTTFSS LDVHVGQSYS VLVTADQPAH DYYVVVSSRF TSTVLTTTGV LRYSGSSGGV 300 SGPIPGGPTI QIDWSLNQAR AIRTNLTASG PRPNPQGSYH YGMINTTRTI RLASSAGQVN 360 GKQRYAVNSV SFNPADTPLK LADYFKIDAD YFKIDGVYRV GSVQSQPTGG GIYLDTSVLQ 420 ADYRTFVEIV FENPENIVQT WHLDGYSFWV VGMDGGKWSP DSRNEYNLRD ALARCTVQVY 480 PSSWTAIYIA LDNVGMWNLR SEFWARQYLG QQLYLRVYTT STSLRDEFPI PKNALLCGRA 540 SGRSTRPL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 0 | 8 | 548 | 542 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 11 | 545 | 539 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 1 | 542 | 550 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 10 | 545 | 536 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 14 | 541 | 545 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL09733.1 | 0 | 1 | 548 | 1 | 541 | At1g76160/T23E18_10 [Arabidopsis thaliana] |
GenBank | AAM97070.1 | 0 | 1 | 548 | 1 | 541 | pectinesterase, putative [Arabidopsis thaliana] |
GenBank | ACJ85585.1 | 0 | 5 | 548 | 6 | 544 | unknown [Medicago truncatula] |
RefSeq | NP_177743.1 | 0 | 1 | 548 | 1 | 541 | sks5 (SKU5 Similar 5); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002510630.1 | 0 | 1 | 548 | 5 | 546 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 28 | 538 | 4 | 539 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1asq_A | 0 | 28 | 538 | 4 | 539 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1asp_B | 0 | 28 | 538 | 4 | 539 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1asp_A | 0 | 28 | 538 | 4 | 539 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1aso_B | 0 | 28 | 538 | 4 | 539 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |