y
Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | Medtr3g083450.1 |
Family | AA1 |
Protein Properties | Length: 551 Molecular Weight: 61805.6 Isoelectric Point: 9.0474 |
Chromosome | Chromosome/Scaffold: 3 Start: 26928061 End: 26929825 |
Description | SKU5 similar 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 44 | 501 | 0 |
QQGILINGQFPGPEINSTSNNNVVVNVFNNLDEPLLFTWHGVQQRKNSWQDGTLGVQCPILPGTNYTYKFQVKDQIGSYFYYPTTGLQRAVGGFGGLRIF SRLLIPVPYADPEDEYWVLIGDWYGKSHKTLKMELDSGRSIGRPAGVIINGKNAKGDGSDEPLYTMKPGKTYKYRICNTGLKDTLNFRFQGHGMKLVETE GSHVVQNVYDSLDVHVGQCYTVLVTADKEPKDYYMVASTRMTKYNLLGKGIIRYTNGKGPASPMLPPAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYH YGQINITRTIKFVNSVSNVNGKLRYAINGVSHVDPETPVKLAEYYGVADKVFKYNIISDEPPIDLRAITIAPNVMQTTFRTFIEIIFENPGKVLQSYNLG GYSFFVVAGEPGTWTPEKRKGYNLLDAISRHTIQVFPKSWAAIMLTFDNAGMWQLRSE |
Full Sequence |
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Protein Sequence Length: 551 Download |
MGRGAMLAAL MLCLLGVTVY GEDPYIYYTW KVTYGTISPL GTPQQGILIN GQFPGPEINS 60 TSNNNVVVNV FNNLDEPLLF TWHGVQQRKN SWQDGTLGVQ CPILPGTNYT YKFQVKDQIG 120 SYFYYPTTGL QRAVGGFGGL RIFSRLLIPV PYADPEDEYW VLIGDWYGKS HKTLKMELDS 180 GRSIGRPAGV IINGKNAKGD GSDEPLYTMK PGKTYKYRIC NTGLKDTLNF RFQGHGMKLV 240 ETEGSHVVQN VYDSLDVHVG QCYTVLVTAD KEPKDYYMVA STRMTKYNLL GKGIIRYTNG 300 KGPASPMLPP APVGWAWSLN QFRSFRWNLT ASAARPNPQG SYHYGQINIT RTIKFVNSVS 360 NVNGKLRYAI NGVSHVDPET PVKLAEYYGV ADKVFKYNII SDEPPIDLRA ITIAPNVMQT 420 TFRTFIEIIF ENPGKVLQSY NLGGYSFFVV AGEPGTWTPE KRKGYNLLDA ISRHTIQVFP 480 KSWAAIMLTF DNAGMWQLRS EHAEHRYLGQ QLYLSVESEE KSTRDEYNLP ETQLVCGIVK 540 DMPRPPPKYV * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02354 | PLN02354 | 0 | 19 | 547 | 529 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 17 | 537 | 522 | + oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 19 | 537 | 519 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 19 | 547 | 533 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 20 | 540 | 533 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002297609.1 | 0 | 4 | 547 | 2 | 550 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002299087.1 | 0 | 4 | 547 | 2 | 548 | hypothetical protein POPTRDRAFT_750403 [Populus trichocarpa] |
RefSeq | XP_002303974.1 | 0 | 6 | 547 | 1 | 550 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523381.1 | 0 | 3 | 547 | 2 | 548 | multicopper oxidase, putative [Ricinus communis] |
RefSeq | XP_002523382.1 | 0 | 4 | 547 | 3 | 548 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 27 | 537 | 5 | 539 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1asq_A | 0 | 27 | 537 | 5 | 539 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1asp_B | 0 | 27 | 537 | 5 | 539 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1asp_A | 0 | 27 | 537 | 5 | 539 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1aso_B | 0 | 27 | 537 | 5 | 539 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |