y
Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00030616m |
Family | AA1 |
Protein Properties | Length: 590 Molecular Weight: 65530.2 Isoelectric Point: 6.4415 |
Chromosome | Chromosome/Scaffold: 005949 Start: 7693 End: 12210 |
Description | Cupredoxin superfamily protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 42 | 511 | 0 |
QQVIAINKQFPGPVMNVTTNYNVVVNVLNSLDEPLLITWDGIQHRKNCWQDGVLGTTCPIPPGWNWTYNFQVKDQIGSFFYFPSLGMQRAAGGFGGITVN NRAVISVPFDTPDGDITLFIGDWYKKNHTHLRKMLDDGKELGMPDGVLMNGKGPYRYNDSLVQDGIEYETIKVEPGKTYRFRVHNVGVSTSLNFRIQNHN LALVETEGSYTMKQNFTNLDIHVGQSYSFLVTMDQNASSDYYIVASARFVNESLWTRVTGVAILQYSNSKGKASGPLPDPPNDEYDKTFSMNQARSIRMN VSTGAARPNPQGSFHYGSINVSQIYKLRNEPPVIINGKKRTTLSGISYSPPDTPLRLADLYDKKGLYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQ NNDTIVQTYHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTE |
Full Sequence |
---|
Protein Sequence Length: 590 Download |
MAALAPLLAV AFLAAAAHAA DPFAFFDWDV TYMTASPLGV PQQVIAINKQ FPGPVMNVTT 60 NYNVVVNVLN SLDEPLLITW DGIQHRKNCW QDGVLGTTCP IPPGWNWTYN FQVKDQIGSF 120 FYFPSLGMQR AAGGFGGITV NNRAVISVPF DTPDGDITLF IGDWYKKNHT HLRKMLDDGK 180 ELGMPDGVLM NGKGPYRYND SLVQDGIEYE TIKVEPGKTY RFRVHNVGVS TSLNFRIQNH 240 NLALVETEGS YTMKQNFTNL DIHVGQSYSF LVTMDQNASS DYYIVASARF VNESLWTRVT 300 GVAILQYSNS KGKASGPLPD PPNDEYDKTF SMNQARSIRM NVSTGAARPN PQGSFHYGSI 360 NVSQIYKLRN EPPVIINGKK RTTLSGISYS PPDTPLRLAD LYDKKGLYTL DFPTMPIDGP 420 PVIRTSVINS TYKNFLEIVF QNNDTIVQTY HIDGYAFWVV GMDYGEWTEN SRGTYNKWDG 480 VSRCTTQVFP GAWTAVMLSL DSPGFWNVRT ENLDTWYLGQ ETYIRVVDPD GGYNVTEMVS 540 PDNMLYCGLL KDKQKAQKPH GSSSSAAAAK LNNYLLVVLV SLLALALGH* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 1.0e-178 | 28 | 548 | 522 | + oxidoreductase | ||
PLN00044 | PLN00044 | 0 | 28 | 557 | 533 | + multi-copper oxidase-related protein; Provisional | ||
PLN02354 | PLN02354 | 0 | 28 | 555 | 537 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 28 | 548 | 530 | + copper ion binding / pectinesterase | ||
PLN02835 | PLN02835 | 0 | 28 | 548 | 522 | + oxidoreductase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN34194.1 | 0 | 21 | 572 | 23 | 574 | unknown [Zea mays] |
RefSeq | NP_001056550.1 | 0 | 21 | 561 | 24 | 564 | Os06g0104300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002266352.1 | 0 | 7 | 580 | 11 | 583 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002437669.1 | 0 | 27 | 588 | 28 | 589 | hypothetical protein SORBIDRAFT_10g000470 [Sorghum bicolor] |
RefSeq | XP_002466968.1 | 0 | 17 | 588 | 21 | 593 | hypothetical protein SORBIDRAFT_01g017580 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 26 | 548 | 6 | 539 | A Chain A, Human N-Acetyltransferase 1 |
PDB | 1asq_A | 0 | 26 | 548 | 6 | 539 | A Chain A, Human N-Acetyltransferase 1 |
PDB | 1asp_B | 0 | 26 | 548 | 6 | 539 | A Chain A, Human N-Acetyltransferase 1 |
PDB | 1asp_A | 0 | 26 | 548 | 6 | 539 | A Chain A, Human N-Acetyltransferase 1 |
PDB | 1aso_B | 0 | 26 | 548 | 6 | 539 | A Chain A, Human N-Acetyltransferase 1 |