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Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01038557001 |
Family | GT5 |
Protein Properties | Length: 569 Molecular Weight: 62887.2 Isoelectric Point: 5.6512 |
Chromosome | Chromosome/Scaffold: 16 Start: 21844741 End: 21851539 |
Description | Glycogen/starch synthases, ADP-glucose type |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 59 | 558 | 0 |
NIVFVTSESAPYSKTGGLGDVCGSLPIALAAHGHRVMVVSPRYQNGTCSDEIFSGASDLEHPIKVHCFGGVQEVSFFHEYRAGVDWVFVDHPSYHRPGNP YGDGYGAFGDNQFRFTLLCHAACEAPLVLPLGGFTYGEKCLFLVNDWHASLVPVLLAAKYRPHGVYKDARTVLVIHNLAHQGVEPAVTYDNLGLPPEWYG AVEWVFPTWARTHALDTGQAVNLLKGAIVTVDRILTVSKGYAWEVTTPEGGYGLHELLTSRKAVINGITNGIDVSEWDPSSDEHIPFHYSAEDLSGKVQC KIALQKELSLPIRPDCPLIGFIGRLDYQKGIDVIRLATPELMGEDVQLVMLGSGNPEDEEWMRVMESTYRDKFRGWVGFNVPISHRITASCDILLMPSRF EPCGLNQLYAMRYGAVPVVHGTGGLRDTVENFNPYAGGGSGEGTGWTFSPLSKDTMLAALRVAIRTYREHKPSWERLMKRGMEKDYTWDKAALEYEQVFK |
Full Sequence |
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Protein Sequence Length: 569 Download |
MLVNTDKKDA SDSVGFHLVP PPSGDNGVID PHEKLSTQKE AETGNSEGEE ERKTKVTYNI 60 VFVTSESAPY SKTGGLGDVC GSLPIALAAH GHRVMVVSPR YQNGTCSDEI FSGASDLEHP 120 IKVHCFGGVQ EVSFFHEYRA GVDWVFVDHP SYHRPGNPYG DGYGAFGDNQ FRFTLLCHAA 180 CEAPLVLPLG GFTYGEKCLF LVNDWHASLV PVLLAAKYRP HGVYKDARTV LVIHNLAHQG 240 VEPAVTYDNL GLPPEWYGAV EWVFPTWART HALDTGQAVN LLKGAIVTVD RILTVSKGYA 300 WEVTTPEGGY GLHELLTSRK AVINGITNGI DVSEWDPSSD EHIPFHYSAE DLSGKVQCKI 360 ALQKELSLPI RPDCPLIGFI GRLDYQKGID VIRLATPELM GEDVQLVMLG SGNPEDEEWM 420 RVMESTYRDK FRGWVGFNVP ISHRITASCD ILLMPSRFEP CGLNQLYAMR YGAVPVVHGT 480 GGLRDTVENF NPYAGGGSGE GTGWTFSPLS KDTMLAALRV AIRTYREHKP SWERLMKRGM 540 EKDYTWDKAA LEYEQVFKWA FIDPPYVS* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 2.0e-104 | 63 | 558 | 510 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 3.0e-141 | 59 | 566 | 517 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 6.0e-174 | 59 | 558 | 508 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 59 | 559 | 502 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 0 | 59 | 558 | 501 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV25893.1 | 0 | 2 | 568 | 69 | 633 | starch synthase isoform I [Manihot esculenta] |
DDBJ | BAD18845.1 | 0 | 1 | 566 | 74 | 644 | starch synthase I precursor [Phaseolus vulgaris] |
EMBL | CBI23015.1 | 0 | 1 | 568 | 1 | 568 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277372.1 | 0 | 1 | 568 | 66 | 633 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321996.1 | 0 | 2 | 568 | 80 | 649 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 59 | 557 | 11 | 508 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3vue_A | 0 | 59 | 557 | 11 | 508 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 1rzv_B | 0 | 59 | 558 | 2 | 473 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzv_A | 0 | 59 | 558 | 2 | 473 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzu_B | 0 | 59 | 558 | 2 | 473 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO595058 | 492 | 75 | 566 | 0 |
CF213618 | 275 | 295 | 569 | 0 |
EE062866 | 267 | 228 | 494 | 0 |
HO581986 | 367 | 168 | 533 | 0 |
HO581986 | 32 | 535 | 566 | 0.0002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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