y
Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 80176 |
Family | GT5 |
Protein Properties | Length: 549 Molecular Weight: 60828.2 Isoelectric Point: 7.4043 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 40 | 538 | 0 |
NIVFVAAEVAPYSKVGGLSDVCGSLPVVLAARGHRVMVVSPRYMNGVTDHRYSGAYDAQCRIRIGCFSGQHEVAFFHEYKDGVDWVFVDHCCYHRPGNPY GDGRGAFGDNQFRYTLLCYAACEAPLVLPLGGYIYGDNCIFLANDWHASLVPVLLAAKYRRHGVYLGARSIVVIHNITHQGCEPGTTYAQLGLPPEWYGA LEWVFPTWARKHAFDKGEAVNHLKGGLVTADRIVTVSEGYAWEITTSEGGYGLDGLLRSRKIVISGITNGINMAEWDPTCDKQIAAHYSFQNLSGKAACK ASFQKELGLAVRPDVPLIGFIGRLDFQKGPDLLQAALPALMTDDIQMVMLGSGDAAMESWMQWAESHYRDKFRGWVGFNVPLTHRLIAGCDILVMPSRFE PCGLTQLYAMRYGTIPVVHCTGGLRDTVEDFHPFANNGQGAGTGWTFYPCTKDAMLGVLWTAIGTYRHHKDSWKGIMRRAMSQDYSWDRAAAKYEQLFE |
Full Sequence |
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Protein Sequence Length: 549 Download |
MDQTVSDLVP PSSEGTKDDK GHQIQAGTRK SKQQARKTYN IVFVAAEVAP YSKVGGLSDV 60 CGSLPVVLAA RGHRVMVVSP RYMNGVTDHR YSGAYDAQCR IRIGCFSGQH EVAFFHEYKD 120 GVDWVFVDHC CYHRPGNPYG DGRGAFGDNQ FRYTLLCYAA CEAPLVLPLG GYIYGDNCIF 180 LANDWHASLV PVLLAAKYRR HGVYLGARSI VVIHNITHQG CEPGTTYAQL GLPPEWYGAL 240 EWVFPTWARK HAFDKGEAVN HLKGGLVTAD RIVTVSEGYA WEITTSEGGY GLDGLLRSRK 300 IVISGITNGI NMAEWDPTCD KQIAAHYSFQ NLSGKAACKA SFQKELGLAV RPDVPLIGFI 360 GRLDFQKGPD LLQAALPALM TDDIQMVMLG SGDAAMESWM QWAESHYRDK FRGWVGFNVP 420 LTHRLIAGCD ILVMPSRFEP CGLTQLYAMR YGTIPVVHCT GGLRDTVEDF HPFANNGQGA 480 GTGWTFYPCT KDAMLGVLWT AIGTYRHHKD SWKGIMRRAM SQDYSWDRAA AKYEQLFEWA 540 TIDRPYTS* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 2.0e-110 | 44 | 537 | 513 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 3.0e-141 | 40 | 540 | 506 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 4.0e-168 | 40 | 538 | 507 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 40 | 539 | 501 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 0 | 40 | 538 | 503 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
Swiss-Prot | A2Y9M4 | 0 | 30 | 547 | 124 | 640 | SSY1_ORYSI RecName: Full=Soluble starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Starch synthase I; AltName: Full=SSS 1; Flags: Precursor |
GenBank | EAZ35910.1 | 0 | 30 | 547 | 124 | 640 | hypothetical protein OsJ_20213 [Oryza sativa Japonica Group] |
RefSeq | NP_001056881.1 | 0 | 30 | 547 | 124 | 640 | Os06g0160700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001104892.1 | 0 | 30 | 547 | 123 | 639 | plastid starch synthase I precursor [Zea mays] |
RefSeq | XP_001784416.1 | 0 | 33 | 548 | 12 | 527 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 40 | 537 | 11 | 508 | A Chain A, Crystal Structure Of Chitinase C From Streptomyces Griseus Hut6037 |
PDB | 3vue_A | 0 | 40 | 537 | 11 | 508 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 40 | 537 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 40 | 537 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 40 | 537 | 2 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO595058 | 491 | 56 | 546 | 0 |
HO581986 | 368 | 148 | 514 | 0 |
HO581986 | 368 | 148 | 514 | 0 |
HO442390 | 314 | 79 | 392 | 0 |
HO595058 | 491 | 56 | 546 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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