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Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29866.m000609 |
Family | GT5 |
Protein Properties | Length: 624 Molecular Weight: 69283 Isoelectric Point: 8.4283 |
Chromosome | Chromosome/Scaffold: 29866 Start: 23953 End: 26917 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 82 | 596 | 0 |
LIFVGTEVGPWSKTGGLGDVLGGLPPAMAANGHRVMTISPRYDQYKDAWDTNFVVQVKVGDRIETVRYFHCCYKRGVDRVFVDHPMFLEKIWGKTGSKLY GPQAGDDYEDNQLRFSLFCQAAIEAPRLLSLNTSKYFSGPYGEDVIFIANDWHTALVPCYLKSIYKARGIYKNAKVAFCIHNIAYQGRFAIADFSLLNLP DQFKRSFDFIDGYDKPVKGRKINWMKAGISESDRVVTVSPYYAEELVSGVEKGVELENILRMTGIIGIVNGMDVQEWNPSTDKYINVKFDATTVTDAKPL LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPYFIQENVQIIILGTGKKHMEEQIMQLETLYPSKARGAAKFNVPLAHMIIAGADFILVPSR FEPCGLIQLHAMRYGTVRPLSSTPHFNSKVASEMFQLLLQLVDLWTLKEGYTGFQMGAFSVECDKVDPEDAIAVAKTVKRALAVHGTRALVEMIQNGMRQ DLSWKGPAKKWEKLL |
Full Sequence |
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Protein Sequence Length: 624 Download |
MASLSASHFV IKRCHINDEA NVSQPIVTLS KNNSLSNRVG LWLNKLDMLK LRSKATARKV 60 SNSTSENSKQ FGVIKCGVGM NLIFVGTEVG PWSKTGGLGD VLGGLPPAMA ANGHRVMTIS 120 PRYDQYKDAW DTNFVVQVKV GDRIETVRYF HCCYKRGVDR VFVDHPMFLE KIWGKTGSKL 180 YGPQAGDDYE DNQLRFSLFC QAAIEAPRLL SLNTSKYFSG PYGEDVIFIA NDWHTALVPC 240 YLKSIYKARG IYKNAKVAFC IHNIAYQGRF AIADFSLLNL PDQFKRSFDF IDGYDKPVKG 300 RKINWMKAGI SESDRVVTVS PYYAEELVSG VEKGVELENI LRMTGIIGIV NGMDVQEWNP 360 STDKYINVKF DATTVTDAKP LLKEALQAEV GLPVDRNIPV IGFIGRLEEQ KGSDILAAAI 420 PYFIQENVQI IILGTGKKHM EEQIMQLETL YPSKARGAAK FNVPLAHMII AGADFILVPS 480 RFEPCGLIQL HAMRYGTVRP LSSTPHFNSK VASEMFQLLL QLVDLWTLKE GYTGFQMGAF 540 SVECDKVDPE DAIAVAKTVK RALAVHGTRA LVEMIQNGMR QDLSWKGPAK KWEKLLLNLG 600 VPGSEPGIEG EEIAPLAKEN IATP 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 2.0e-75 | 85 | 599 | 531 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 6.0e-104 | 80 | 595 | 533 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 5.0e-118 | 80 | 595 | 523 | + glycogen synthase; Provisional | ||
TIGR02095 | glgA | 2.0e-157 | 80 | 599 | 528 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 8.0e-159 | 81 | 596 | 529 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACH72975.1 | 0 | 1 | 624 | 1 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
GenBank | ACM78591.1 | 0 | 1 | 624 | 1 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
GenBank | ACV72639.1 | 0 | 1 | 624 | 1 | 609 | granule-bound starch synthase 1 [Gossypium hirsutum] |
RefSeq | XP_002273608.1 | 0 | 1 | 624 | 1 | 614 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002524417.1 | 0 | 1 | 624 | 1 | 624 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 80 | 624 | 10 | 536 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3vue_A | 0 | 80 | 624 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 80 | 599 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 80 | 599 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 80 | 599 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AJ568414 | 629 | 1 | 624 | 0 |
HO825853 | 536 | 88 | 623 | 0 |
HO629148 | 575 | 51 | 624 | 0 |
HO778340 | 402 | 49 | 448 | 0 |
ES801687 | 355 | 139 | 493 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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