y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.C02159.1 |
Family | GT5 |
Protein Properties | Length: 622 Molecular Weight: 69544.5 Isoelectric Point: 6.2651 |
Chromosome | Chromosome/Scaffold: 3 Start: 39042588 End: 39061637 |
Description | starch synthase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 116 | 612 | 0 |
HIIHVTAEMAPIAKVGGLGDVVTGLARACLARGHTVDVMLPFYECIEKQHIIDLTLITTYNSFHDGNWILTNAYRGEVSGIPVIFVEPSNQFFKGKYVYG GSYDELEAYIFFSRACLEWMQVTGVQPDIIHVHEWQTSALPLLYWDMYHHLSLKRPRITLTIHNMEHYGECRQEQLSKCGLDGAIYATTDRAVDDRTIGH NPERLSLLKGGIVYSNAVVTVSPTYLKETLCSGWLSSTLIRNRDKYFGVLNGIDPAIWNPATDIFLPVKFNAQKLEGKKFCKNYVQKGLGLPVESAGRAE GKDVVNGTQQKVPLVVCITRLVAQKGLHLIIHAIKHIEELGGQMVVLGKAPDDRVEREFKDLADLYNEGPAIRILLMYSEELSHMLYAAADMVLVPSLYE PCGLAQMFGMRYGAVPIVRRTGGLADTVFDIDDHSNSHMANGFVFEGIDEGSLNWALDRAFSLYKNKPDEWTGLVRKAMERDNSWNNTAGNYIEVYN |
Full Sequence |
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Protein Sequence Length: 622 Download |
MEYTMVGAFG HPSLIPGQIS LRRKKKSSRL PTGATAPYNL SSASRRIKAV DTNSQDLNVH 60 LEARAESVVD TINPVLKDLV WPSPSDETPF WKKEFPTWDV SIELPADVEK DSDLMHIIHV 120 TAEMAPIAKV GGLGDVVTGL ARACLARGHT VDVMLPFYEC IEKQHIIDLT LITTYNSFHD 180 GNWILTNAYR GEVSGIPVIF VEPSNQFFKG KYVYGGSYDE LEAYIFFSRA CLEWMQVTGV 240 QPDIIHVHEW QTSALPLLYW DMYHHLSLKR PRITLTIHNM EHYGECRQEQ LSKCGLDGAI 300 YATTDRAVDD RTIGHNPERL SLLKGGIVYS NAVVTVSPTY LKETLCSGWL SSTLIRNRDK 360 YFGVLNGIDP AIWNPATDIF LPVKFNAQKL EGKKFCKNYV QKGLGLPVES AGRAEGKDVV 420 NGTQQKVPLV VCITRLVAQK GLHLIIHAIK HIEELGGQMV VLGKAPDDRV EREFKDLADL 480 YNEGPAIRIL LMYSEELSHM LYAAADMVLV PSLYEPCGLA QMFGMRYGAV PIVRRTGGLA 540 DTVFDIDDHS NSHMANGFVF EGIDEGSLNW ALDRAFSLYK NKPDEWTGLV RKAMERDNSW 600 NNTAGNYIEV YNSVRVRDDS S* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0297 | GlgA | 5.0e-128 | 115 | 615 | 507 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 1.0e-162 | 115 | 615 | 510 | + glycogen synthase; Provisional | ||
PLN02939 | PLN02939 | 6.0e-164 | 115 | 617 | 510 | + transferase, transferring glycosyl groups | ||
TIGR02095 | glgA | 3.0e-175 | 115 | 614 | 504 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 116 | 613 | 505 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACD13790.1 | 0 | 79 | 617 | 89 | 614 | starch synthase VI precursor [Solanum lycopersicum] |
GenBank | ACD13791.1 | 0 | 38 | 617 | 28 | 607 | starch synthase VI precursor [Vitis vinifera] |
GenBank | ACL36485.1 | 0 | 74 | 617 | 114 | 655 | starch synthase VI precursor [Picea glauca] |
RefSeq | XP_002268126.1 | 0 | 38 | 617 | 28 | 607 | PREDICTED: starch synthase VI [Vitis vinifera] |
RefSeq | XP_002331426.1 | 0 | 77 | 617 | 79 | 617 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d1j_A | 0 | 115 | 615 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 115 | 616 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 115 | 616 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4t_A | 0 | 115 | 616 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2qzs_A | 0 | 115 | 616 | 1 | 478 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO248199 | 259 | 4 | 262 | 0 |
EX373959 | 303 | 189 | 491 | 0 |
HS072706 | 213 | 20 | 232 | 0 |
GE474726 | 265 | 137 | 401 | 0 |
CO474248 | 254 | 135 | 388 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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