y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10025051m |
Family | GT5 |
Protein Properties | Length: 689 Molecular Weight: 77292.5 Isoelectric Point: 6.9159 |
Chromosome | Chromosome/Scaffold: 7 Start: 4689411 End: 4697698 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 206 | 672 | 0 |
HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSYFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRES VYGYSDDFERFTYFSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGLDPARLHRPDRLQDNTKT HLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIV VGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAA PIAVTSSDIEFRYFAEFDHESTRFSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAMLQDFSWDA |
Full Sequence |
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Protein Sequence Length: 689 Download |
MSMNFLINAA IPSPLYFSQQ LNTTNRKPIR APLRCSTNNG EVNDLSTIPS QIELGAQDNT 60 GVSKEEFRSS SIEREMKNND IWRLFKEAQR NILYLNKQRL DAVEELNKTN REKQLLLEKI 120 EQLEVEKQAG LGKGNLSIFW ELLLRIDSMV LTGMINSGEA SNLRKLVFDY KVSVADLFAD 180 ILPEGDADLL AELRRFGSGS KKNGFHIIHI CTEMDPLVSI GSLASYVTGL SGALQRKGHL 240 VEVILPKYAC MNLDGVQGLR EIKAECYSYF NGQLHANKIW IGVVSGIGVT FIQPLHYSSF 300 FNRESVYGYS DDFERFTYFS RASLDYIVKS RKQPDVLHIH NWETAIVGPL FWDIFVKQGL 360 EGTRILLSCH NLNSLCLEHP DKLALCGLDP ARLHRPDRLQ DNTKTHLVNI LKGGVVYSNK 420 VVIVSSMHSK GRIIRSLSHG LESTLAIHQD KLLVAPCGFD SSTWDPSNDK FLTENYCAED 480 MKGKTVCKVT LQQQLGLSKD ASTIVVGCIF SDVSDVFLEN LKAVVRGAKM RGIQFVFTGT 540 NKLPSASRAL VSFQEELKDG IVIFVDSYDD ALLHLIFSGS DIILCHSFHD PLLQVPLKAL 600 KYGAAPIAVT SSDIEFRYFA EFDHESTRFS RFISSTFGNI SLSQALEEIK NNPLSWKRKI 660 KDAMLQDFSW DAECYDIHIS AYTAIKNL* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK00654 | glgA | 1.0e-70 | 206 | 675 | 504 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 4.0e-71 | 206 | 675 | 514 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 7.0e-79 | 205 | 685 | 500 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PLN02939 | PLN02939 | 4.0e-117 | 139 | 672 | 546 | + transferase, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACD13787.1 | 0 | 28 | 688 | 34 | 687 | starch synthase V precursor [Lotus japonicus] |
GenBank | ACD13788.1 | 0 | 21 | 688 | 21 | 677 | starch synthase V precursor [Solanum tuberosum] |
GenBank | ACD13789.1 | 0 | 3 | 688 | 1 | 682 | starch synthase V precursor [Vitis vinifera] |
RefSeq | XP_002310316.1 | 0 | 79 | 688 | 65 | 669 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528907.1 | 0 | 203 | 649 | 205 | 650 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3guh_A | 2e-22 | 206 | 670 | 2 | 462 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2r4u_A | 2e-22 | 206 | 670 | 2 | 462 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2r4t_A | 2e-22 | 206 | 670 | 2 | 462 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2qzs_A | 2e-22 | 206 | 670 | 2 | 462 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 3cx4_A | 6e-22 | 206 | 670 | 2 | 462 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EY766100 | 284 | 218 | 501 | 0 |
EY764753 | 242 | 177 | 418 | 0 |
EY764667 | 239 | 177 | 415 | 0 |
EY764667 | 56 | 414 | 469 | 1e-20 |
EY764753 | 28 | 416 | 443 | 0.0001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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