y
Basic Information | |
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Species | Eucalyptus grandis |
Cazyme ID | Eucgr.K00387.3 |
Family | GT5 |
Protein Properties | Length: 514 Molecular Weight: 55008.9 Isoelectric Point: 5.4855 |
Chromosome | Chromosome/Scaffold: 11 Start: 4507678 End: 4513351 |
Description | Glycogen/starch synthases, ADP-glucose type |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 155 | 504 | 0 |
NIVFVTAEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYQNGTVADERYAGAVDLGHCVKVHCFGGVQEVSFFHEYRKGVDWVFVDHPSYQRPGNP YGDSFGAFGDNQFRFTLLCHAACEAPLVLPLGGFTYGENCLFLVNDWHAGLVPVLLGAKYRPFGVYKDARSVLVIHNLAHQGVEAAVTYKNLGLPPQWYK ALEWVFPTWARTHALDTGEAVNVLKGAIVTADRILTVSKGYSWEITTAEGGYGLNELLSSRKFVLSGITNGIDITEWDPSTDEYLASHYCVSDLSGKVQC KIALQKELGLPILPDCPLIGFIGRLDYQKGIDLISSAMPELMEDDIQFVS |
Full Sequence |
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Protein Sequence Length: 514 Download |
METLHLARGI PRRTASAARA GVAASRAAGR ARSAVSFWRR RSAGAGPVVL RRSAGGGRGG 60 GGGFGGFGGS PQKDEFAVED GERESEGEGG SGGGGLVLGA ERDASGAVVG FSLAPQTRPD 120 YVEVAGAEGE KGTDEIKETE ETEGEEEAQT KLSYNIVFVT AEAAPYSKTG GLGDVCGSLP 180 IALAARGHRV MVVSPRYQNG TVADERYAGA VDLGHCVKVH CFGGVQEVSF FHEYRKGVDW 240 VFVDHPSYQR PGNPYGDSFG AFGDNQFRFT LLCHAACEAP LVLPLGGFTY GENCLFLVND 300 WHAGLVPVLL GAKYRPFGVY KDARSVLVIH NLAHQGVEAA VTYKNLGLPP QWYKALEWVF 360 PTWARTHALD TGEAVNVLKG AIVTADRILT VSKGYSWEIT TAEGGYGLNE LLSSRKFVLS 420 GITNGIDITE WDPSTDEYLA SHYCVSDLSG KVQCKIALQK ELGLPILPDC PLIGFIGRLD 480 YQKGIDLISS AMPELMEDDI QFVSYAWVWR STI* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam08323 | Glyco_transf_5 | 1.0e-75 | 156 | 412 | 257 | + Starch synthase catalytic domain. | ||
COG0297 | GlgA | 5.0e-81 | 155 | 505 | 354 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 4.0e-98 | 155 | 503 | 357 | + glycogen synthase; Provisional | ||
TIGR02095 | glgA | 2.0e-109 | 155 | 503 | 350 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 4.0e-125 | 155 | 503 | 349 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABV25893.1 | 0 | 97 | 503 | 69 | 472 | starch synthase isoform I [Manihot esculenta] |
DDBJ | BAD18845.1 | 0 | 68 | 503 | 50 | 485 | starch synthase I precursor [Phaseolus vulgaris] |
EMBL | CBI23015.1 | 0 | 96 | 503 | 2 | 407 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277372.1 | 0 | 96 | 503 | 67 | 472 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321996.1 | 0 | 69 | 503 | 60 | 488 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 155 | 503 | 11 | 360 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3vue_A | 0 | 155 | 503 | 11 | 360 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 5.60519e-45 | 155 | 497 | 2 | 319 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3cx4_A | 1.96182e-44 | 155 | 497 | 2 | 319 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3cop_A | 1.96182e-44 | 155 | 497 | 2 | 319 | A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex With Adp And Acceptor Analogue Heppso |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV161524 | 304 | 150 | 453 | 0 |
GO842198 | 326 | 178 | 503 | 0 |
HO595058 | 333 | 171 | 503 | 0 |
GO885224 | 326 | 151 | 476 | 0 |
GO885136 | 310 | 151 | 460 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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