Genome Details
Selected Rep_genome_ID: Rep_996
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Pantoea
Species
Pantoea septica
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_996 | 4,577,281 | 99.9481% | 0.111773% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_996_CGC10 | CGCFAM_00060 | Yes | 15 | 7 | |
| Rep_996_CGC35 | CGCFAM_00144 | Yes | 13 | 2 | |
| Rep_996_CGC12 | CGCFAM_00299 | Yes | 4 | 1 | beta-glucan |
| Rep_996_CGC45 | CGCFAM_00487 | Yes | 13 | 2 | |
| Rep_996_CGC28 | CGCFAM_00625 | Yes | 17 | 1 | |
| Rep_996_CGC29 | CGCFAM_00733 | Yes | 5 | 1 | |
| Rep_996_CGC47 | CGCFAM_05657 | Yes | 7 | 1 | |
| Rep_996_CGC42 | CGCFAM_05658 | Yes | 7 | 2 | |
| Rep_996_CGC37 | CGCFAM_08726 | Yes | 5 | 1 | |
| Rep_996_CGC36 | CGCFAM_10891 | Yes | 4 | 1 | |
| Rep_996_CGC13 | CGCFAM_10892 | Yes | 10 | 2 |
Top CAZyme Families