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Cluster: Rep_996_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_996_c_6 Rep_996_c_6_389 435641 436558 + GT2
CAZyme Rep_996_c_6 Rep_996_c_6_390 436623 437375 + GT2
CAZyme Rep_996_c_6 Rep_996_c_6_391 437416 438450 + GT4
pfam Rep_996_c_6 Rep_996_c_6_392 438541 440751 + Head_binding
pfam Rep_996_c_6 Rep_996_c_6_393 440938 442200 + PS_pyruv_trans
CAZyme Rep_996_c_6 Rep_996_c_6_394 442205 443428 + GT4
TC Rep_996_c_6 Rep_996_c_6_395 443425 444765 + 2.A.66.2.8
pfam Rep_996_c_6 Rep_996_c_6_396 445041 445937 + NTP_transferase
pfam Rep_996_c_6 Rep_996_c_6_397 445991 447004 + adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NmrA | KR | NAD_binding_10 | GDP_Man_Dehyd
TC Rep_996_c_6 Rep_996_c_6_398 447388 448155 + 3.A.1.103.1
TC Rep_996_c_6 Rep_996_c_6_399 448155 448895 + 3.A.1.103.1
STP Rep_996_c_6 Rep_996_c_6_400 448914 450065 + Pyr_redox_2
CAZyme Rep_996_c_6 Rep_996_c_6_401 450062 450955 + GT2
CAZyme Rep_996_c_6 Rep_996_c_6_402 451119 452096 + GT4
CAZyme Rep_996_c_6 Rep_996_c_6_403 452117 453946 + GT111 | GT8
Gene ID: Rep_996_c_6_389
Type: CAZyme
Location: 435641 - 436558 (+)
Gene ID: Rep_996_c_6_390
Type: CAZyme
Location: 436623 - 437375 (+)
Gene ID: Rep_996_c_6_391
Type: CAZyme
Location: 437416 - 438450 (+)
Gene ID: Rep_996_c_6_392
Type: pfam
Location: 438541 - 440751 (+)
Gene ID: Rep_996_c_6_393
Type: pfam
Location: 440938 - 442200 (+)
Gene ID: Rep_996_c_6_394
Type: CAZyme
Location: 442205 - 443428 (+)
Gene ID: Rep_996_c_6_395
Type: TC
Location: 443425 - 444765 (+)
Gene ID: Rep_996_c_6_396
Type: pfam
Location: 445041 - 445937 (+)
Gene ID: Rep_996_c_6_397
Type: pfam
Location: 445991 - 447004 (+)
Gene ID: Rep_996_c_6_398
Type: TC
Location: 447388 - 448155 (+)
Gene ID: Rep_996_c_6_399
Type: TC
Location: 448155 - 448895 (+)
Gene ID: Rep_996_c_6_400
Type: STP
Location: 448914 - 450065 (+)
Gene ID: Rep_996_c_6_401
Type: CAZyme
Location: 450062 - 450955 (+)
Gene ID: Rep_996_c_6_402
Type: CAZyme
Location: 451119 - 452096 (+)
Gene ID: Rep_996_c_6_403
Type: CAZyme
Location: 452117 - 453946 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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