dbCAN Logo

Cluster: Rep_996_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_996_c_27 Rep_996_c_27_59 43461 44447 + GT2
pfam Rep_996_c_27 Rep_996_c_27_60 44444 46423 + Formyl_trans_N | 3Beta_HSD | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam Rep_996_c_27 Rep_996_c_27_61 46420 47304 + Polysacc_deac_1
CAZyme Rep_996_c_27 Rep_996_c_27_62 47326 48999 + GT83
TC Rep_996_c_27 Rep_996_c_27_63 48996 49328 + 2.A.7.22.2
TC Rep_996_c_27 Rep_996_c_27_64 49337 49705 + 2.A.7.22.2
TC Rep_996_c_27 Rep_996_c_27_65 49700 51223 - 9.B.34.1.1
pfam Rep_996_c_27 Rep_996_c_27_66 51398 52894 - Lyase_aromatic
TC Rep_996_c_27 Rep_996_c_27_67 52891 53685 - 3.A.1.3.6
TC Rep_996_c_27 Rep_996_c_27_68 53687 54415 - 3.A.1.3.5
TC Rep_996_c_27 Rep_996_c_27_69 54427 55146 - 3.A.1.3.5
TC Rep_996_c_27 Rep_996_c_27_70 55159 55458 - 3.A.1.3.6
TC Rep_996_c_27 Rep_996_c_27_71 55481 56011 - 3.A.1.3.6
Gene ID: Rep_996_c_27_59
Type: CAZyme
Location: 43461 - 44447 (+)
Gene ID: Rep_996_c_27_60
Type: pfam
Location: 44444 - 46423 (+)
Gene ID: Rep_996_c_27_61
Type: pfam
Location: 46420 - 47304 (+)
Gene ID: Rep_996_c_27_62
Type: CAZyme
Location: 47326 - 48999 (+)
Gene ID: Rep_996_c_27_63
Type: TC
Location: 48996 - 49328 (+)
Gene ID: Rep_996_c_27_64
Type: TC
Location: 49337 - 49705 (+)
Gene ID: Rep_996_c_27_65
Type: TC
Location: 49700 - 51223 (-)
Gene ID: Rep_996_c_27_66
Type: pfam
Location: 51398 - 52894 (-)
Gene ID: Rep_996_c_27_67
Type: TC
Location: 52891 - 53685 (-)
Gene ID: Rep_996_c_27_68
Type: TC
Location: 53687 - 54415 (-)
Gene ID: Rep_996_c_27_69
Type: TC
Location: 54427 - 55146 (-)
Gene ID: Rep_996_c_27_70
Type: TC
Location: 55159 - 55458 (-)
Gene ID: Rep_996_c_27_71
Type: TC
Location: 55481 - 56011 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List