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Cluster: Rep_996_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_996_c_30 Rep_996_c_30_108 112299 113909 + 3.A.1.5.27
TC Rep_996_c_30 Rep_996_c_30_109 114209 115228 + 3.A.1.5.39
TC Rep_996_c_30 Rep_996_c_30_110 115238 116140 + 3.A.1.5.39
TC Rep_996_c_30 Rep_996_c_30_111 116152 117138 + 3.A.1.5.27
TC Rep_996_c_30 Rep_996_c_30_112 117128 118150 + 3.A.1.5.27
pfam Rep_996_c_30 Rep_996_c_30_113 118601 119185 + CBP_BcsO
STP Rep_996_c_30 Rep_996_c_30_114 119176 119979 + CbiA
CAZyme Rep_996_c_30 Rep_996_c_30_115 120030 122129 + GT2
TC Rep_996_c_30 Rep_996_c_30_116 122126 124675 + 4.D.3.1.6
pfam Rep_996_c_30 Rep_996_c_30_117 124672 126450 + TPR_16 | TPR_16 | TPR_16 | TPR_16 | TPR_19
TC Rep_996_c_30 Rep_996_c_30_118 126390 128492 + 1.B.55.3.1
pfam Rep_996_c_30 Rep_996_c_30_119 128492 128935 + Cellsynth_D
CAZyme Rep_996_c_30 Rep_996_c_30_120 128948 129952 + GH8
Gene ID: Rep_996_c_30_108
Type: TC
Location: 112299 - 113909 (+)
Gene ID: Rep_996_c_30_109
Type: TC
Location: 114209 - 115228 (+)
Gene ID: Rep_996_c_30_110
Type: TC
Location: 115238 - 116140 (+)
Gene ID: Rep_996_c_30_111
Type: TC
Location: 116152 - 117138 (+)
Gene ID: Rep_996_c_30_112
Type: TC
Location: 117128 - 118150 (+)
Gene ID: Rep_996_c_30_113
Type: pfam
Location: 118601 - 119185 (+)
Gene ID: Rep_996_c_30_114
Type: STP
Location: 119176 - 119979 (+)
Gene ID: Rep_996_c_30_115
Type: CAZyme
Location: 120030 - 122129 (+)
Gene ID: Rep_996_c_30_116
Type: TC
Location: 122126 - 124675 (+)
Gene ID: Rep_996_c_30_117
Type: pfam
Location: 124672 - 126450 (+)
Gene ID: Rep_996_c_30_118
Type: TC
Location: 126390 - 128492 (+)
Gene ID: Rep_996_c_30_119
Type: pfam
Location: 128492 - 128935 (+)
Gene ID: Rep_996_c_30_120
Type: CAZyme
Location: 128948 - 129952 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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