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Cluster: Rep_996_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_996_c_11 Rep_996_c_11_19 20052 23807 - GH1 | GT4
TC Rep_996_c_11 Rep_996_c_11_20 24249 25016 - 3.A.1.3.24
TC Rep_996_c_11 Rep_996_c_11_21 25018 25668 - 3.A.1.3.10
TC Rep_996_c_11 Rep_996_c_11_22 25960 26724 + 3.A.1.3.27
TF Rep_996_c_11 Rep_996_c_11_23 26772 27377 + HTH_3
sulfatase Rep_996_c_11 Rep_996_c_11_24 27404 28732 + S1_2
CAZyme Rep_996_c_11 Rep_996_c_11_25 28766 30445 - AA3_2
sulfatase Rep_996_c_11 Rep_996_c_11_26 30473 31945 - S1_6
STP Rep_996_c_11 Rep_996_c_11_27 31959 32555 - TetR_N
TC Rep_996_c_11 Rep_996_c_11_28 32787 34814 + 2.A.15.1.4
Gene ID: Rep_996_c_11_19
Type: CAZyme
Location: 20052 - 23807 (-)
Gene ID: Rep_996_c_11_20
Type: TC
Location: 24249 - 25016 (-)
Gene ID: Rep_996_c_11_21
Type: TC
Location: 25018 - 25668 (-)
Gene ID: Rep_996_c_11_22
Type: TC
Location: 25960 - 26724 (+)
Gene ID: Rep_996_c_11_23
Type: TF
Location: 26772 - 27377 (+)
Gene ID: Rep_996_c_11_24
Type: sulfatase
Location: 27404 - 28732 (+)
Gene ID: Rep_996_c_11_25
Type: CAZyme
Location: 28766 - 30445 (-)
Gene ID: Rep_996_c_11_26
Type: sulfatase
Location: 30473 - 31945 (-)
Gene ID: Rep_996_c_11_27
Type: STP
Location: 31959 - 32555 (-)
Gene ID: Rep_996_c_11_28
Type: TC
Location: 32787 - 34814 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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