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Genome Details

Selected Rep_genome_ID: Rep_505
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→
Species
Phocaeicola excrementipullorum
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR008497 3,467,751 97.6% 0.87% China Asia CGMR
Rep_505 3,429,958 97.9817% 0% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
Rep_505_CGC21 CGCFAM_00001 Yes 6 4 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_505_CGC32 CGCFAM_00001 Yes 6 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_505_CGC36 CGCFAM_00001 Yes 5 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_505_CGC55 CGCFAM_00001 Yes 4 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
Rep_505_CGC13 CGCFAM_00005 Yes 13 9
Rep_505_CGC40 CGCFAM_00031 Yes 5 2 pectin/galactan
Rep_505_CGC41 CGCFAM_00034 Yes 6 2
Rep_505_CGC26 CGCFAM_00110 Yes 15 5 pectin/host glycan
Rep_505_CGC20 CGCFAM_00170 Yes 8 4
Rep_505_CGC53 CGCFAM_00186 Yes 5 1
Rep_505_CGC2 CGCFAM_00219 Yes 7 4 host glycan
Rep_505_CGC30 CGCFAM_00304 Yes 7 1
Rep_505_CGC6 CGCFAM_00333 Yes 11 6 beta-mannan
Rep_505_CGC54 CGCFAM_00352 Yes 9 1
Rep_505_CGC29 CGCFAM_00567 Yes 6 1
Rep_505_CGC10 CGCFAM_00630 Yes 4 1
Rep_505_CGC28 CGCFAM_00646 Yes 9 4 arabinogalactan
Rep_505_CGC16 CGCFAM_00743 Yes 4 1
Rep_505_CGC52 CGCFAM_00764 Yes 3 1
Rep_505_CGC48 CGCFAM_01113 Yes 5 1
Rep_505_CGC12 CGCFAM_01181 Yes 3 1
Rep_505_CGC9 CGCFAM_01664 Yes 3 1
Rep_505_CGC61 CGCFAM_01728 Yes 4 1
Rep_505_CGC60 CGCFAM_01797 Yes 7 1
Rep_505_CGC51 CGCFAM_01912 Yes 6 3
Top CAZyme Families