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Cluster: Rep_505_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_505_c_0 Rep_505_c_0_57 78819 80507 - GH20
CAZyme Rep_505_c_0 Rep_505_c_0_58 80919 83153 + PL12_2
pfam Rep_505_c_0 Rep_505_c_0_59 83180 85507 + SGBP_BT4661-like
TC Rep_505_c_0 Rep_505_c_0_60 85650 88796 + 1.B.14.6.1
TC Rep_505_c_0 Rep_505_c_0_61 88811 90544 + 8.A.46.1.3
CAZyme Rep_505_c_0 Rep_505_c_0_62 90705 91985 + GH88
CAZyme Rep_505_c_0 Rep_505_c_0_63 91988 93991 + PL12_2
Gene ID: Rep_505_c_0_57
Type: CAZyme
Location: 78819 - 80507 (-)
Gene ID: Rep_505_c_0_58
Type: CAZyme
Location: 80919 - 83153 (+)
Gene ID: Rep_505_c_0_59
Type: pfam
Location: 83180 - 85507 (+)
Gene ID: Rep_505_c_0_60
Type: TC
Location: 85650 - 88796 (+)
Gene ID: Rep_505_c_0_61
Type: TC
Location: 88811 - 90544 (+)
Gene ID: Rep_505_c_0_62
Type: CAZyme
Location: 90705 - 91985 (+)
Gene ID: Rep_505_c_0_63
Type: CAZyme
Location: 91988 - 93991 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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