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Cluster: Rep_505_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_505_c_4 Rep_505_c_4_82 92555 93379 + GT5
pfam Rep_505_c_4 Rep_505_c_4_83 93393 94808 + DUF4270
TC Rep_505_c_4 Rep_505_c_4_84 95046 96401 - 1.A.11.1.4
pfam Rep_505_c_4 Rep_505_c_4_85 96442 96798 - P-II
NULL(UNKNOWN) Rep_505_c_4 Rep_505_c_4_86 96893 97624 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_505_c_4 Rep_505_c_4_87 98043 99410 - GH57
CAZyme Rep_505_c_4 Rep_505_c_4_88 99429 100688 - GT4
CAZyme Rep_505_c_4 Rep_505_c_4_89 100717 102624 - GH133
Gene ID: Rep_505_c_4_82
Type: CAZyme
Location: 92555 - 93379 (+)
Gene ID: Rep_505_c_4_83
Type: pfam
Location: 93393 - 94808 (+)
Gene ID: Rep_505_c_4_84
Type: TC
Location: 95046 - 96401 (-)
Gene ID: Rep_505_c_4_85
Type: pfam
Location: 96442 - 96798 (-)
Gene ID: Rep_505_c_4_86
Type:
Location: 96893 - 97624 (-)
Gene ID: Rep_505_c_4_87
Type: CAZyme
Location: 98043 - 99410 (-)
Gene ID: Rep_505_c_4_88
Type: CAZyme
Location: 99429 - 100688 (-)
Gene ID: Rep_505_c_4_89
Type: CAZyme
Location: 100717 - 102624 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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