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Cluster: Rep_505_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_505_c_30 Rep_505_c_30_5 6514 6978 + 9.B.27.3.3
pfam Rep_505_c_30 Rep_505_c_30_6 6991 7665 + Methyltransf_30
TC Rep_505_c_30 Rep_505_c_30_7 7668 9899 + 2.A.37.1.8
TC Rep_505_c_30 Rep_505_c_30_8 10030 11253 - 2.A.1.35.1
NULL(UNKNOWN) Rep_505_c_30 Rep_505_c_30_9 11351 11551 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_505_c_30 Rep_505_c_30_10 11584 12486 + ZnuA
TC Rep_505_c_30 Rep_505_c_30_11 12464 13171 + 3.A.1.15.11
pfam Rep_505_c_30 Rep_505_c_30_12 13259 16585 + TMEM260-like
CAZyme Rep_505_c_30 Rep_505_c_30_13 16628 17323 + CE4
Gene ID: Rep_505_c_30_5
Type: TC
Location: 6514 - 6978 (+)
Gene ID: Rep_505_c_30_6
Type: pfam
Location: 6991 - 7665 (+)
Gene ID: Rep_505_c_30_7
Type: TC
Location: 7668 - 9899 (+)
Gene ID: Rep_505_c_30_8
Type: TC
Location: 10030 - 11253 (-)
Gene ID: Rep_505_c_30_9
Type:
Location: 11351 - 11551 (+)
Gene ID: Rep_505_c_30_10
Type: pfam
Location: 11584 - 12486 (+)
Gene ID: Rep_505_c_30_11
Type: TC
Location: 12464 - 13171 (+)
Gene ID: Rep_505_c_30_12
Type: pfam
Location: 13259 - 16585 (+)
Gene ID: Rep_505_c_30_13
Type: CAZyme
Location: 16628 - 17323 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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