Genome Details
Selected Rep_genome_ID: Rep_46
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
RF16
Species
RF16 sp900542355
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| GH138_maxbin.015 | 2,551,783 | 96.51% | 0.54% | NA | Africa | H3AfricaPhase2 |
| Rep_46 | 2,446,714 | 97.043% | 0.537634% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_46_CGC19 | CGCFAM_00013 | Yes | 5 | 1 | |
| Rep_46_CGC24 | CGCFAM_00062 | Yes | 8 | 2 | beta-glucan |
| Rep_46_CGC16 | CGCFAM_00451 | Yes | 5 | 3 | |
| Rep_46_CGC13 | CGCFAM_00610 | Yes | 4 | 1 | |
| Rep_46_CGC9 | CGCFAM_01078 | Yes | 12 | 7 | |
| Rep_46_CGC22 | CGCFAM_01478 | Yes | 8 | 2 | |
| Rep_46_CGC15 | CGCFAM_01486 | Yes | 7 | 2 | |
| Rep_46_CGC7 | CGCFAM_04909 | Yes | 9 | 4 | |
| Rep_46_CGC6 | CGCFAM_05903 | Yes | 9 | 3 | |
| Rep_46_CGC12 | CGCFAM_06370 | Yes | 7 | 1 | |
| Rep_46_CGC18 | CGCFAM_07638 | Yes | 5 | 2 |
Top CAZyme Families