Genome Details
Selected Rep_genome_ID: Rep_453
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| Rep_453 | 6,137,899 | 97.3606% | 0.27881% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_453_CGC68 | CGCFAM_00478 | Yes | 6 | 3 | |
| Rep_453_CGC79 | CGCFAM_00496 | Yes | 4 | 1 | |
| Rep_453_CGC46 | CGCFAM_00542 | Yes | 7 | 4 | |
| Rep_453_CGC73 | CGCFAM_00552 | Yes | 8 | 2 | |
| Rep_453_CGC69 | CGCFAM_00567 | Yes | 4 | 1 | |
| Rep_453_CGC83 | CGCFAM_00582 | Yes | 8 | 2 | arabinogalactan |
| Rep_453_CGC76 | CGCFAM_00667 | Yes | 13 | 2 | |
| Rep_453_CGC19 | CGCFAM_00742 | Yes | 7 | 4 | |
| Rep_453_CGC53 | CGCFAM_00840 | Yes | 4 | 2 | |
| Rep_453_CGC30 | CGCFAM_00873 | Yes | 5 | 1 | |
| Rep_453_CGC21 | CGCFAM_01238 | Yes | 7 | 4 | pectin |
| Rep_453_CGC85 | CGCFAM_01418 | Yes | 3 | 2 | |
| Rep_453_CGC77 | CGCFAM_01542 | Yes | 7 | 3 | |
| Rep_453_CGC89 | CGCFAM_01826 | Yes | 10 | 5 | |
| Rep_453_CGC45 | CGCFAM_02587 | Yes | 3 | 1 | |
| Rep_453_CGC25 | CGCFAM_02719 | Yes | 5 | 1 | |
| Rep_453_CGC66 | CGCFAM_02873 | Yes | 4 | 2 | |
| Rep_453_CGC40 | CGCFAM_02935 | Yes | 4 | 2 | pectin |
| Rep_453_CGC55 | CGCFAM_03627 | Yes | 16 | 1 | |
| Rep_453_CGC51 | CGCFAM_04269 | Yes | 3 | 1 | |
| Rep_453_CGC49 | CGCFAM_04737 | Yes | 14 | 9 | |
| Rep_453_CGC1 | CGCFAM_05199 | Yes | 3 | 1 | |
| Rep_453_CGC57 | CGCFAM_05306 | Yes | 6 | 2 | |
| Rep_453_CGC13 | CGCFAM_05404 | Yes | 9 | 5 | |
| Rep_453_CGC31 | CGCFAM_05491 | Yes | 5 | 2 |
Top CAZyme Families