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Cluster: Rep_453_CGC73

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_453_c_333 Rep_453_c_333_7 8659 10230 - 2.A.21.3.19
STP Rep_453_c_333 Rep_453_c_333_8 10266 12074 - B12-binding | B12-binding_2
CAZyme Rep_453_c_333 Rep_453_c_333_9 12165 14408 - GH31_3
CAZyme Rep_453_c_333 Rep_453_c_333_10 14779 16620 - GH141
pfam Rep_453_c_333 Rep_453_c_333_11 16866 18821 + DUF4842
TC Rep_453_c_333 Rep_453_c_333_12 18953 20323 - 2.A.6.2.20
TC Rep_453_c_333 Rep_453_c_333_13 20354 23455 - 2.A.6.2.22
TC Rep_453_c_333 Rep_453_c_333_14 23528 24736 - 2.A.6.2.41
Gene ID: Rep_453_c_333_7
Type: TC
Location: 8659 - 10230 (-)
Gene ID: Rep_453_c_333_8
Type: STP
Location: 10266 - 12074 (-)
Gene ID: Rep_453_c_333_9
Type: CAZyme
Location: 12165 - 14408 (-)
Gene ID: Rep_453_c_333_10
Type: CAZyme
Location: 14779 - 16620 (-)
Gene ID: Rep_453_c_333_11
Type: pfam
Location: 16866 - 18821 (+)
Gene ID: Rep_453_c_333_12
Type: TC
Location: 18953 - 20323 (-)
Gene ID: Rep_453_c_333_13
Type: TC
Location: 20354 - 23455 (-)
Gene ID: Rep_453_c_333_14
Type: TC
Location: 23528 - 24736 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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