Genome Details
Selected Rep_genome_ID: Rep_3486
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_D
Species
Ruminococcus_D sp900752625
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| MGYG000001798 | 2,367,577 | 95.97% | 0% | Denmark | Europe | UHGG |
| Rep_3486 | 2,375,689 | 97.3154% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_3486_CGC7 | CGCFAM_00032 | Yes | 3 | 2 | |
| Rep_3486_CGC12 | CGCFAM_00160 | Yes | 5 | 2 | alpha-glucan |
| Rep_3486_CGC3 | CGCFAM_01661 | Yes | 4 | 3 | |
| Rep_3486_CGC10 | CGCFAM_03918 | Yes | 7 | 1 | |
| Rep_3486_CGC24 | CGCFAM_07874 | Yes | 4 | 1 | |
| Rep_3486_CGC11 | CGCFAM_10240 | Yes | 4 | 1 | |
| Rep_3486_CGC15 | CGCFAM_10841 | Yes | 4 | 2 | |
| Rep_3486_CGC19 | CGCFAM_10842 | Yes | 6 | 1 | |
| Rep_3486_CGC4 | CGCFAM_10843 | Yes | 9 | 1 | |
| Rep_3486_CGC20 | CGCFAM_10844 | Yes | 5 | 2 |
Top CAZyme Families