Cluster: Rep_3486_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: Rep_3486
- CGC Family ID: CGCFAM_00160
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3486_c_15 | Rep_3486_c_15_135 | 150896 | 152542 | - | GH13_29 |
| TC | Rep_3486_c_15 | Rep_3486_c_15_136 | 152556 | 154499 | - | 4.A.1.2.13 |
| TF | Rep_3486_c_15 | Rep_3486_c_15_137 | 154868 | 155590 | + | GntR |
| TC | Rep_3486_c_15 | Rep_3486_c_15_138 | 155960 | 157303 | - | 2.A.66.1.33 |
| CAZyme | Rep_3486_c_15 | Rep_3486_c_15_139 | 157419 | 159896 | - | GH59 |
Gene ID: Rep_3486_c_15_135
Type: CAZyme
Location: 150896 - 152542 (-)
Type: CAZyme
Location: 150896 - 152542 (-)
Gene ID: Rep_3486_c_15_136
Type: TC
Location: 152556 - 154499 (-)
Type: TC
Location: 152556 - 154499 (-)
Gene ID: Rep_3486_c_15_137
Type: TF
Location: 154868 - 155590 (+)
Type: TF
Location: 154868 - 155590 (+)
Gene ID: Rep_3486_c_15_138
Type: TC
Location: 155960 - 157303 (-)
Type: TC
Location: 155960 - 157303 (-)
Gene ID: Rep_3486_c_15_139
Type: CAZyme
Location: 157419 - 159896 (-)
Type: CAZyme
Location: 157419 - 159896 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp900752625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.