Cluster: Rep_3486_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3486
- CGC Family ID: CGCFAM_10844
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3486_c_36 | Rep_3486_c_36_2 | 3317 | 5734 | - | GT35 |
| pfam | Rep_3486_c_36 | Rep_3486_c_36_3 | 6070 | 6810 | - | DUF5131 |
| CAZyme | Rep_3486_c_36 | Rep_3486_c_36_4 | 7022 | 7828 | + | GH25 |
| TF | Rep_3486_c_36 | Rep_3486_c_36_5 | 8177 | 9169 | + | HTH_11 |
| TC | Rep_3486_c_36 | Rep_3486_c_36_6 | 9257 | 10597 | - | 2.A.22.5.3 |
Gene ID: Rep_3486_c_36_2
Type: CAZyme
Location: 3317 - 5734 (-)
Type: CAZyme
Location: 3317 - 5734 (-)
Gene ID: Rep_3486_c_36_3
Type: pfam
Location: 6070 - 6810 (-)
Type: pfam
Location: 6070 - 6810 (-)
Gene ID: Rep_3486_c_36_4
Type: CAZyme
Location: 7022 - 7828 (+)
Type: CAZyme
Location: 7022 - 7828 (+)
Gene ID: Rep_3486_c_36_5
Type: TF
Location: 8177 - 9169 (+)
Type: TF
Location: 8177 - 9169 (+)
Gene ID: Rep_3486_c_36_6
Type: TC
Location: 9257 - 10597 (-)
Type: TC
Location: 9257 - 10597 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp900752625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.