Cluster: Rep_3486_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3486
- CGC Family ID: CGCFAM_03918
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3486_c_15 | Rep_3486_c_15_97 | 106263 | 107600 | + | 2.A.38.4.1 |
| STP | Rep_3486_c_15 | Rep_3486_c_15_98 | 107891 | 109915 | + | HATPase_c | HisKA |
| TF | Rep_3486_c_15 | Rep_3486_c_15_99 | 109908 | 110609 | + | Trans_reg_C |
| TC | Rep_3486_c_15 | Rep_3486_c_15_100 | 110716 | 112563 | - | 3.A.1.135.6 |
| TC | Rep_3486_c_15 | Rep_3486_c_15_101 | 112564 | 114873 | - | 3.A.1.135.6 |
| TF | Rep_3486_c_15 | Rep_3486_c_15_102 | 114857 | 115372 | - | MarR |
| CAZyme | Rep_3486_c_15 | Rep_3486_c_15_103 | 115654 | 117204 | + | GH13_44 |
Gene ID: Rep_3486_c_15_97
Type: TC
Location: 106263 - 107600 (+)
Type: TC
Location: 106263 - 107600 (+)
Gene ID: Rep_3486_c_15_98
Type: STP
Location: 107891 - 109915 (+)
Type: STP
Location: 107891 - 109915 (+)
Gene ID: Rep_3486_c_15_99
Type: TF
Location: 109908 - 110609 (+)
Type: TF
Location: 109908 - 110609 (+)
Gene ID: Rep_3486_c_15_100
Type: TC
Location: 110716 - 112563 (-)
Type: TC
Location: 110716 - 112563 (-)
Gene ID: Rep_3486_c_15_101
Type: TC
Location: 112564 - 114873 (-)
Type: TC
Location: 112564 - 114873 (-)
Gene ID: Rep_3486_c_15_102
Type: TF
Location: 114857 - 115372 (-)
Type: TF
Location: 114857 - 115372 (-)
Gene ID: Rep_3486_c_15_103
Type: CAZyme
Location: 115654 - 117204 (+)
Type: CAZyme
Location: 115654 - 117204 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp900752625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.