Cluster: Rep_3486_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3486
- CGC Family ID: CGCFAM_07874
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3486_c_54 | Rep_3486_c_54_135 | 141994 | 144402 | + | 2.A.6.4.2 |
| CAZyme | Rep_3486_c_54 | Rep_3486_c_54_136 | 144609 | 146153 | - | CE20 |
| pfam | Rep_3486_c_54 | Rep_3486_c_54_137 | 146216 | 146698 | - | DUF4829 |
| TC | Rep_3486_c_54 | Rep_3486_c_54_138 | 146848 | 148464 | - | 3.A.1.121.4 |
Gene ID: Rep_3486_c_54_135
Type: TC
Location: 141994 - 144402 (+)
Type: TC
Location: 141994 - 144402 (+)
Gene ID: Rep_3486_c_54_136
Type: CAZyme
Location: 144609 - 146153 (-)
Type: CAZyme
Location: 144609 - 146153 (-)
Gene ID: Rep_3486_c_54_137
Type: pfam
Location: 146216 - 146698 (-)
Type: pfam
Location: 146216 - 146698 (-)
Gene ID: Rep_3486_c_54_138
Type: TC
Location: 146848 - 148464 (-)
Type: TC
Location: 146848 - 148464 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp900752625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.