Cluster: Rep_3486_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3486
- CGC Family ID: CGCFAM_10842
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3486_c_28 | Rep_3486_c_28_54 | 69514 | 72093 | + | 3.A.3.5.15 |
| pfam | Rep_3486_c_28 | Rep_3486_c_28_55 | 72083 | 72340 | + | Trns_repr_metal |
| CAZyme | Rep_3486_c_28 | Rep_3486_c_28_56 | 72600 | 74867 | - | GH74 | GH74 |
| TC | Rep_3486_c_28 | Rep_3486_c_28_57 | 74887 | 75588 | - | 3.A.1.122.7 |
| TF | Rep_3486_c_28 | Rep_3486_c_28_58 | 75657 | 76565 | - | HTH_1 |
| TC | Rep_3486_c_28 | Rep_3486_c_28_59 | 76827 | 77519 | + | 3.A.2.1.2 |
Gene ID: Rep_3486_c_28_54
Type: TC
Location: 69514 - 72093 (+)
Type: TC
Location: 69514 - 72093 (+)
Gene ID: Rep_3486_c_28_55
Type: pfam
Location: 72083 - 72340 (+)
Type: pfam
Location: 72083 - 72340 (+)
Gene ID: Rep_3486_c_28_56
Type: CAZyme
Location: 72600 - 74867 (-)
Type: CAZyme
Location: 72600 - 74867 (-)
Gene ID: Rep_3486_c_28_57
Type: TC
Location: 74887 - 75588 (-)
Type: TC
Location: 74887 - 75588 (-)
Gene ID: Rep_3486_c_28_58
Type: TF
Location: 75657 - 76565 (-)
Type: TF
Location: 75657 - 76565 (-)
Gene ID: Rep_3486_c_28_59
Type: TC
Location: 76827 - 77519 (+)
Type: TC
Location: 76827 - 77519 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
FB2012
Species
FB2012 sp900752625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.