Genome Details
Selected Rep_genome_ID: Rep_2160
Total Genomes Found: 8
Total Genomes Found: 8
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp000154245
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C162.CMAG_1 | 2,825,044 | 99.33% | 0% | China(Inner Mongolia) | Asia | IMGG |
| CGMR074819 | 2,539,750 | 98.66% | 0% | China | Asia | CGMR |
| GCA_021635525.1_ASM2163552v1_genomic | 2,510,632 | 98.32% | 0% | NA | Africa | H3AfricaPhase1 |
| GCA_021636315.1_ASM2163631v1_genomic | 2,528,229 | 97.99% | 2.57% | NA | Africa | H3AfricaPhase1 |
| Rep_2160 | 2,888,725 | 99.3289% | 0% | NA | NA | WIS |
| SPMP82_bin.8 | 2,705,145 | 97.99% | 0.67% | Singapore | Asia | SPMP |
| SPMP97_bin.51 | 2,644,467 | 97.32% | 0% | Singapore | Asia | SPMP |
| SW006_maxbin.017_sub | 2,721,272 | 99.33% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_2160_CGC9 | CGCFAM_00011 | Yes | 7 | 2 | |
| Rep_2160_CGC17 | CGCFAM_00032 | Yes | 6 | 2 | |
| Rep_2160_CGC18 | CGCFAM_03727 | Yes | 6 | 4 | |
| Rep_2160_CGC5 | CGCFAM_05012 | Yes | 4 | 1 | |
| Rep_2160_CGC11 | CGCFAM_06096 | Yes | 7 | 1 | |
| Rep_2160_CGC12 | CGCFAM_09960 | Yes | 10 | 4 |
Top CAZyme Families