Genome Details
Selected Rep_genome_ID: Rep_1939
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera massiliensis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3703 | 2,426,953 | 100% | 0% | Japan | Asia | HRGM |
| Rep_1939 | 2,755,760 | 99.4012% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_1939_CGC14 | CGCFAM_00077 | Yes | 8 | 1 | |
| Rep_1939_CGC11 | CGCFAM_01128 | Yes | 7 | 1 | |
| Rep_1939_CGC1 | CGCFAM_01389 | Yes | 5 | 1 | |
| Rep_1939_CGC5 | CGCFAM_02877 | Yes | 11 | 1 | |
| Rep_1939_CGC16 | CGCFAM_03518 | Yes | 8 | 1 | |
| Rep_1939_CGC10 | CGCFAM_07634 | Yes | 8 | 4 |
Top CAZyme Families