Cluster: Rep_1939_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1939
- CGC Family ID: CGCFAM_01389
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1939_c_0 | Rep_1939_c_0_54 | 63642 | 65039 | + | AA4 |
| NULL(UNKNOWN) | Rep_1939_c_0 | Rep_1939_c_0_55 | 65051 | 65950 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_1939_c_0 | Rep_1939_c_0_56 | 65910 | 66116 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1939_c_0 | Rep_1939_c_0_57 | 66057 | 67934 | - | 2.A.114.1.5 |
| TC | Rep_1939_c_0 | Rep_1939_c_0_58 | 68382 | 70259 | - | 2.A.114.1.5 |
Gene ID: Rep_1939_c_0_54
Type: CAZyme
Location: 63642 - 65039 (+)
Type: CAZyme
Location: 63642 - 65039 (+)
Gene ID: Rep_1939_c_0_55
Type:
Location: 65051 - 65950 (+)
Type:
Location: 65051 - 65950 (+)
Gene ID: Rep_1939_c_0_56
Type:
Location: 65910 - 66116 (+)
Type:
Location: 65910 - 66116 (+)
Gene ID: Rep_1939_c_0_57
Type: TC
Location: 66057 - 67934 (-)
Type: TC
Location: 66057 - 67934 (-)
Gene ID: Rep_1939_c_0_58
Type: TC
Location: 68382 - 70259 (-)
Type: TC
Location: 68382 - 70259 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Megasphaera
Species
Megasphaera massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.