PROTEIN: Rep_1939_c_0_55
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Protein File & Metadata
Source:
Rep_1939_c_0_55.pdb
Genome ID:
Protein ID:
Rep_1939_c_0_55
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Protein Sequence
MESICNDCPR RCGVVRSLLW NEKGMPGFCH SPLQPVVARA ALHRWEEPCI SGTRGSGTVF 60 FTSCNLRCCF CQNSIISMGR KGVPITPGRL REIYGELIEK GAHNINLVTP TPYTSAILES 120 LADPLPVPVV YNCGGYESVE TINRFKDKVQ IYLPDFKYLD SALAERYSGA ADYPQVAAEA 180 ILRMYDQVGP YELDNDGILK KGVIIRHLIL PGCVDNTKAV IDWVRNHFDD GQVLFSLMRQ 240 YVPCGRAGDY PEINRPLTDE EYDEAEQYLF DSGIEDGFVQ EKESASDDFI PDFDGTGVI 299
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1C1C8A2-F1-model_v4 | 1 | 281 | 58 | 352 | 0.8008 |
0.9368 |
| AF-C0NPG2-F1-model_v4 | 1 | 284 | 61 | 356 | 0.7984 |
0.9254 |
| AF-A0A0D2HBZ2-F1-model_v4 | 1 | 281 | 67 | 360 | 0.7904 |
0.9339 |
| AF-A0A175WCY4-F1-model_v4 | 1 | 289 | 64 | 370 | 0.7863 |
0.9076 |
| AF-C1GZG3-F1-model_v4 | 1 | 282 | 79 | 372 | 0.7796 |
0.9292 |
| AF-Q58087-F1-model_v4 | 1 | 280 | 75 | 338 | 0.7554 |
0.9144 |
| AF-Q9I2I5-F1-model_v4 | 3 | 285 | 2 | 232 | 0.7292 |
0.8444 |
| AF-P44743-F1-model_v4 | 33 | 282 | 7 | 262 | 0.7224 |
0.8223 |
| AF-P95188-F1-model_v4 | 1 | 299 | 7 | 360 | 0.716 |
0.7984 |
| AF-P0A9N4-F1-model_v4 | 32 | 280 | 3 | 246 | 0.7134 |
0.8078 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3cb8-assembly1.cif.gz_A | 18 | 279 | 1 | 244 | 0.7127 |
0.8043 |
| 8fsi-assembly1.cif.gz_A | 18 | 279 | 1 | 245 | 0.7122 |
0.8024 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58087-F1-model_v4 | 1 | 280 | 75 | 338 | 0.7554 |
0.9144 |
| AF-P44743-F1-model_v4 | 33 | 282 | 7 | 262 | 0.7224 |
0.8223 |
| AF-P0A9N5-F1-model_v4 | 18 | 280 | 2 | 246 | 0.7138 |
0.8052 |
| AF-P0A9N4-F1-model_v4 | 32 | 280 | 3 | 246 | 0.7134 |
0.8078 |
| AF-P0A9N6-F1-model_v4 | 18 | 280 | 2 | 246 | 0.7134 |
0.8049 |
| AF-P0A9N7-F1-model_v4 | 18 | 280 | 2 | 246 | 0.7123 |
0.804 |
| AF-O27295-F1-model_v4 | 18 | 291 | 3 | 247 | 0.7092 |
0.8026 |
| AF-P43751-F1-model_v4 | 18 | 280 | 3 | 246 | 0.7091 |
0.8034 |
| AF-Q46267-F1-model_v4 | 18 | 274 | 1 | 238 | 0.7069 |
0.8068 |
| AF-Q6GK89-F1-model_v4 | 18 | 281 | 1 | 251 | 0.7041 |
0.7855 |