Genome Details
Selected Rep_genome_ID: Rep_1899
Total Genomes Found: 8
Total Genomes Found: 8
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Anaerovibrio
Species
Anaerovibrio sp900548165
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR051778 | 2,109,430 | 99.35% | 1.52% | China | Asia | CGMR |
| GCA_021626525.1_ASM2162652v1_genomic | 1,949,649 | 96.02% | 1.52% | NA | Africa | H3AfricaPhase1 |
| GCA_021627305.1_ASM2162730v1_genomic | 1,843,004 | 95.36% | 2.15% | NA | Africa | H3AfricaPhase1 |
| GCA_021629585.1_ASM2162958v1_genomic | 1,893,829 | 93.32% | 2.82% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_3486 | 2,189,993 | 99.66% | 1.309% | United Republic of Tanzania | Africa | HRGM |
| KY164_9 | 2,254,833 | 98.71% | 0.99% | NA | Africa | H3AfricaPhase2 |
| MGYG000002113 | 1,986,108 | 99.03% | 1.47% | Mongolia | Asia | UHGG |
| Rep_1899 | 2,356,663 | 95.8913% | 0.312157% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_1899_CGC3 | CGCFAM_00006 | Yes | 3 | 1 | |
| Rep_1899_CGC9 | CGCFAM_00009 | Yes | 9 | 2 | |
| Rep_1899_CGC6 | CGCFAM_00012 | Yes | 8 | 3 | host glycan/beta-glucan |
| Rep_1899_CGC8 | CGCFAM_00169 | Yes | 3 | 1 | |
| Rep_1899_CGC15 | CGCFAM_02124 | Yes | 3 | 1 | |
| Rep_1899_CGC1 | CGCFAM_05093 | Yes | 10 | 5 | |
| Rep_1899_CGC5 | CGCFAM_06335 | Yes | 3 | 1 | |
| Rep_1899_CGC7 | CGCFAM_07043 | Yes | 10 | 2 | |
| Rep_1899_CGC17 | CGCFAM_07437 | Yes | 15 | 4 | |
| Rep_1899_CGC13 | CGCFAM_11175 | Yes | 5 | 2 |
Top CAZyme Families