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Cluster: Rep_1899_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1899_c_1 Rep_1899_c_1_1075 813185 814138 - 3.A.11.1.1
NULL(UNKNOWN) Rep_1899_c_1 Rep_1899_c_1_1076 814141 814320 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1899_c_1 Rep_1899_c_1_1077 814597 815526 + 2.A.28.2.4
pfam Rep_1899_c_1 Rep_1899_c_1_1078 815705 816637 - Transposase_31
NULL(UNKNOWN) Rep_1899_c_1 Rep_1899_c_1_1079 816910 817116 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1899_c_1 Rep_1899_c_1_1080 817094 818929 - GT41
pfam Rep_1899_c_1 Rep_1899_c_1_1081 818955 819737 - MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
NULL(UNKNOWN) Rep_1899_c_1 Rep_1899_c_1_1082 819767 820288 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1899_c_1 Rep_1899_c_1_1083 820324 822549 - GT2
Gene ID: Rep_1899_c_1_1075
Type: TC
Location: 813185 - 814138 (-)
Gene ID: Rep_1899_c_1_1076
Type:
Location: 814141 - 814320 (-)
Gene ID: Rep_1899_c_1_1077
Type: TC
Location: 814597 - 815526 (+)
Gene ID: Rep_1899_c_1_1078
Type: pfam
Location: 815705 - 816637 (-)
Gene ID: Rep_1899_c_1_1079
Type:
Location: 816910 - 817116 (-)
Gene ID: Rep_1899_c_1_1080
Type: CAZyme
Location: 817094 - 818929 (-)
Gene ID: Rep_1899_c_1_1081
Type: pfam
Location: 818955 - 819737 (-)
Gene ID: Rep_1899_c_1_1082
Type:
Location: 819767 - 820288 (-)
Gene ID: Rep_1899_c_1_1083
Type: CAZyme
Location: 820324 - 822549 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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