Cluster: Rep_1899_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1899
- CGC Family ID: CGCFAM_11175
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1899_c_1 | Rep_1899_c_1_1998 | 1591390 | 1592379 | + | 3.A.7.18.1 |
| pfam | Rep_1899_c_1 | Rep_1899_c_1_1999 | 1592382 | 1593344 | + | T2SSF |
| pfam | Rep_1899_c_1 | Rep_1899_c_1_2000 | 1593410 | 1593763 | + | DUF192 |
| CAZyme | Rep_1899_c_1 | Rep_1899_c_1_2001 | 1593778 | 1594479 | - | CE9 |
| CAZyme | Rep_1899_c_1 | Rep_1899_c_1_2002 | 1594436 | 1594978 | - | CE9 |
Gene ID: Rep_1899_c_1_1998
Type: TC
Location: 1591390 - 1592379 (+)
Type: TC
Location: 1591390 - 1592379 (+)
Gene ID: Rep_1899_c_1_1999
Type: pfam
Location: 1592382 - 1593344 (+)
Type: pfam
Location: 1592382 - 1593344 (+)
Gene ID: Rep_1899_c_1_2000
Type: pfam
Location: 1593410 - 1593763 (+)
Type: pfam
Location: 1593410 - 1593763 (+)
Gene ID: Rep_1899_c_1_2001
Type: CAZyme
Location: 1593778 - 1594479 (-)
Type: CAZyme
Location: 1593778 - 1594479 (-)
Gene ID: Rep_1899_c_1_2002
Type: CAZyme
Location: 1594436 - 1594978 (-)
Type: CAZyme
Location: 1594436 - 1594978 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Anaerovibrio
Species
Anaerovibrio sp900548165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.