Genome Details
Selected Rep_genome_ID: Rep_109
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| MGYG000003746 | 1,821,350 | 96.24% | 0.73% | Canada | North America | UHGG |
| Rep_109 | 1,869,550 | 96.441% | 0.314465% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| Rep_109_CGC2 | CGCFAM_00025 | Yes | 5 | 2 | pectin/alpha-glucan |
| Rep_109_CGC13 | CGCFAM_01519 | Yes | 9 | 1 | |
| Rep_109_CGC11 | CGCFAM_02968 | Yes | 4 | 1 | |
| Rep_109_CGC5 | CGCFAM_06313 | Yes | 6 | 2 | |
| Rep_109_CGC10 | CGCFAM_06396 | Yes | 6 | 2 | |
| Rep_109_CGC7 | CGCFAM_11230 | Yes | 5 | 2 |
Top CAZyme Families