dbCAN Logo

Cluster: Rep_109_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_109_c_138 Rep_109_c_138_11 10568 12844 - GH92
pfam Rep_109_c_138 Rep_109_c_138_12 12841 14145 - UPF0004 | TRAM | Radical_SAM | TRAM_2
TC Rep_109_c_138 Rep_109_c_138_13 14157 15116 - 3.A.5.1.1
pfam Rep_109_c_138 Rep_109_c_138_14 15129 16283 - Orn_DAP_Arg_deC
pfam Rep_109_c_138 Rep_109_c_138_15 16594 17043 - ATP-synt_C | ATP-synt_C
TC Rep_109_c_138 Rep_109_c_138_16 17093 18949 - 3.A.2.2.2
pfam Rep_109_c_138 Rep_109_c_138_17 18946 19590 - ATP-synt_D
TC Rep_109_c_138 Rep_109_c_138_18 19613 20968 - 3.A.2.3.3
TC Rep_109_c_138 Rep_109_c_138_19 20982 22775 - 3.A.2.3.3
Gene ID: Rep_109_c_138_11
Type: CAZyme
Location: 10568 - 12844 (-)
Gene ID: Rep_109_c_138_12
Type: pfam
Location: 12841 - 14145 (-)
Gene ID: Rep_109_c_138_13
Type: TC
Location: 14157 - 15116 (-)
Gene ID: Rep_109_c_138_14
Type: pfam
Location: 15129 - 16283 (-)
Gene ID: Rep_109_c_138_15
Type: pfam
Location: 16594 - 17043 (-)
Gene ID: Rep_109_c_138_16
Type: TC
Location: 17093 - 18949 (-)
Gene ID: Rep_109_c_138_17
Type: pfam
Location: 18946 - 19590 (-)
Gene ID: Rep_109_c_138_18
Type: TC
Location: 19613 - 20968 (-)
Gene ID: Rep_109_c_138_19
Type: TC
Location: 20982 - 22775 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List