Cluster: Rep_109_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_109
- CGC Family ID: CGCFAM_11230
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_109_c_65 | Rep_109_c_65_15 | 16118 | 17248 | + | GT19 |
| CAZyme | Rep_109_c_65 | Rep_109_c_65_16 | 17240 | 18202 | - | GT2 |
| NULL(UNKNOWN) | Rep_109_c_65 | Rep_109_c_65_17 | 18216 | 19085 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_109_c_65 | Rep_109_c_65_18 | 19109 | 20398 | - | GARS_A | GARS_C | GARS_N |
| TC | Rep_109_c_65 | Rep_109_c_65_19 | 20419 | 22572 | - | 8.A.51.1.1 |
Gene ID: Rep_109_c_65_15
Type: CAZyme
Location: 16118 - 17248 (+)
Type: CAZyme
Location: 16118 - 17248 (+)
Gene ID: Rep_109_c_65_16
Type: CAZyme
Location: 17240 - 18202 (-)
Type: CAZyme
Location: 17240 - 18202 (-)
Gene ID: Rep_109_c_65_17
Type:
Location: 18216 - 19085 (-)
Type:
Location: 18216 - 19085 (-)
Gene ID: Rep_109_c_65_18
Type: pfam
Location: 19109 - 20398 (-)
Type: pfam
Location: 19109 - 20398 (-)
Gene ID: Rep_109_c_65_19
Type: TC
Location: 20419 - 22572 (-)
Type: TC
Location: 20419 - 22572 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A sp934359325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.