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Genome Details

Selected Rep_genome_ID: MGYG000003383
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Actinomycetota
→
Class
Actinomycetes
→
Order
Actinomycetales
→
Family
Bifidobacteriaceae
→
Genus
Bifidobacterium
→
Species
Bifidobacterium scardovii
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
MGYG000003383 3,123,324 100% 2.38% US North America UHGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
MGYG000003383_CGC6 CGCFAM_00002 Yes 12 4
MGYG000003383_CGC33 CGCFAM_00055 Yes 7 3
MGYG000003383_CGC25 CGCFAM_00391 Yes 4 1
MGYG000003383_CGC8 CGCFAM_00484 Yes 6 1 galactan
MGYG000003383_CGC12 CGCFAM_00526 Yes 4 2
MGYG000003383_CGC40 CGCFAM_00825 Yes 20 6 alpha-glucan
MGYG000003383_CGC60 CGCFAM_00936 Yes 9 4 arabinogalactan/xylan
MGYG000003383_CGC3 CGCFAM_01326 Yes 13 2
MGYG000003383_CGC59 CGCFAM_01691 Yes 11 2
MGYG000003383_CGC53 CGCFAM_01746 Yes 4 1
MGYG000003383_CGC16 CGCFAM_01882 Yes 7 1
MGYG000003383_CGC42 CGCFAM_02069 Yes 6 1
MGYG000003383_CGC39 CGCFAM_02277 Yes 5 1 alpha-glucan
MGYG000003383_CGC21 CGCFAM_02374 Yes 8 2
MGYG000003383_CGC24 CGCFAM_03141 Yes 3 1
MGYG000003383_CGC36 CGCFAM_04892 Yes 4 2
MGYG000003383_CGC38 CGCFAM_04982 Yes 4 1
MGYG000003383_CGC56 CGCFAM_05118 Yes 9 5
MGYG000003383_CGC17 CGCFAM_06228 Yes 3 1
MGYG000003383_CGC19 CGCFAM_06961 Yes 5 1
MGYG000003383_CGC30 CGCFAM_07440 Yes 7 1
MGYG000003383_CGC37 CGCFAM_07950 Yes 3 1
MGYG000003383_CGC35 CGCFAM_08394 Yes 13 3
MGYG000003383_CGC14 CGCFAM_10798 Yes 4 1
Top CAZyme Families