Cluster: MGYG000003383_CGC39
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: MGYG000003383
- CGC Family ID: CGCFAM_02277
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003383_23 | MGYG000003383_23_13 | 13766 | 15649 | - | 1.A.33.1.4 |
| pfam | MGYG000003383_23 | MGYG000003383_23_14 | 16002 | 18101 | - | Alk_phosphatase | Metalloenzyme |
| TF | MGYG000003383_23 | MGYG000003383_23_15 | 18776 | 19786 | + | LacI |
| TC | MGYG000003383_23 | MGYG000003383_23_16 | 20293 | 21666 | + | 3.A.1.1.45 |
| CAZyme | MGYG000003383_23 | MGYG000003383_23_17 | 21701 | 23449 | + | GH13_30 |
Gene ID: MGYG000003383_23_13
Type: TC
Location: 13766 - 15649 (-)
Type: TC
Location: 13766 - 15649 (-)
Gene ID: MGYG000003383_23_14
Type: pfam
Location: 16002 - 18101 (-)
Type: pfam
Location: 16002 - 18101 (-)
Gene ID: MGYG000003383_23_15
Type: TF
Location: 18776 - 19786 (+)
Type: TF
Location: 18776 - 19786 (+)
Gene ID: MGYG000003383_23_16
Type: TC
Location: 20293 - 21666 (+)
Type: TC
Location: 20293 - 21666 (+)
Gene ID: MGYG000003383_23_17
Type: CAZyme
Location: 21701 - 23449 (+)
Type: CAZyme
Location: 21701 - 23449 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium scardovii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.