Genome Details
Selected Rep_genome_ID: MGYG000001887
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp003512525
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG037_87 | 2,727,082 | 98.32% | 0% | NA | Africa | H3AfricaPhase2 |
| CGMR026201 | 2,268,089 | 91.73% | 0.38% | China | Asia | CGMR |
| GH128_109 | 2,671,246 | 98.99% | 0% | NA | Africa | H3AfricaPhase2 |
| MGYG000001887 | 2,739,679 | 98.99% | 0% | Denmark | Europe | UHGG |
| Rep_3454 | 2,807,496 | 95.1342% | 0.33557% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| MGYG000001887_CGC19 | CGCFAM_00011 | Yes | 5 | 3 | |
| MGYG000001887_CGC22 | CGCFAM_00384 | Yes | 4 | 1 | |
| MGYG000001887_CGC8 | CGCFAM_00384 | Yes | 3 | 1 | |
| MGYG000001887_CGC7 | CGCFAM_01332 | Yes | 3 | 1 | |
| MGYG000001887_CGC12 | CGCFAM_01725 | Yes | 3 | 1 | |
| MGYG000001887_CGC31 | CGCFAM_01880 | Yes | 6 | 2 | |
| MGYG000001887_CGC9 | CGCFAM_04064 | Yes | 11 | 1 | |
| MGYG000001887_CGC16 | CGCFAM_04793 | Yes | 7 | 1 | |
| MGYG000001887_CGC26 | CGCFAM_04794 | Yes | 5 | 1 | |
| MGYG000001887_CGC24 | CGCFAM_10145 | Yes | 5 | 1 | |
| MGYG000001887_CGC17 | CGCFAM_10840 | Yes | 9 | 1 |
Top CAZyme Families