Cluster: MGYG000001887_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001887
- CGC Family ID: CGCFAM_10145
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001887_23 | MGYG000001887_23_2 | 1333 | 2664 | - | 1.B.52.2.2 |
| pfam | MGYG000001887_23 | MGYG000001887_23_3 | 2839 | 3339 | - | QueT |
| NULL(UNKNOWN) | MGYG000001887_23 | MGYG000001887_23_4 | 3642 | 3785 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001887_23 | MGYG000001887_23_5 | 3920 | 5308 | + | 2.A.66.1.28 |
| CAZyme | MGYG000001887_23 | MGYG000001887_23_6 | 6256 | 9030 | + | GH3 |
Gene ID: MGYG000001887_23_2
Type: TC
Location: 1333 - 2664 (-)
Type: TC
Location: 1333 - 2664 (-)
Gene ID: MGYG000001887_23_3
Type: pfam
Location: 2839 - 3339 (-)
Type: pfam
Location: 2839 - 3339 (-)
Gene ID: MGYG000001887_23_4
Type:
Location: 3642 - 3785 (-)
Type:
Location: 3642 - 3785 (-)
Gene ID: MGYG000001887_23_5
Type: TC
Location: 3920 - 5308 (+)
Type: TC
Location: 3920 - 5308 (+)
Gene ID: MGYG000001887_23_6
Type: CAZyme
Location: 6256 - 9030 (+)
Type: CAZyme
Location: 6256 - 9030 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp003512525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.